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  5. GSVIVT01034782001

GSVIVT01034782001


Description : Vesicle trafficking.endomembrane trafficking.vacuolar sorting.RMR vacuolar sorting receptor


Gene families : OG_01_0001501 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001501_tree ,
OG_02_0001253 (LandPlants) Phylogenetic Tree(s): OG_02_0001253_tree ,
OG_03_0003205 (SeedPlants) Phylogenetic Tree(s): OG_03_0003205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034782001
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AT5G66160 RMR1, ATRMR1 receptor homology region transmembrane domain ring H2... 0.03 Archaeplastida
LOC_Os03g07130.2 No alias vacuolar sorting receptor (RMR) 0.04 Archaeplastida
LOC_Os08g01360.2 No alias vacuolar sorting receptor (RMR) 0.03 Archaeplastida
Pp3c10_8120V3.1 No alias Protease-associated (PA) RING/U-box zinc finger family protein 0.03 Archaeplastida
Zm00001e021893_P001 No alias vacuolar sorting receptor (RMR) 0.07 Archaeplastida
LOC_Os03g07130.2 No alias vacuolar sorting receptor (RMR) 0.04 LandPlants
Mp4g04900.1 No alias vacuolar sorting receptor (RMR) 0.02 LandPlants
Pp3c10_8120V3.1 No alias Protease-associated (PA) RING/U-box zinc finger family protein 0.03 LandPlants
Solyc06g065330.4.1 No alias vacuolar sorting receptor (RMR) 0.03 LandPlants
Zm00001e021893_P001 No alias vacuolar sorting receptor (RMR) 0.07 LandPlants
AMTR_s00118p00107060 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 SeedPlants
LOC_Os03g07130.2 No alias vacuolar sorting receptor (RMR) 0.04 SeedPlants
Zm00001e003223_P001 No alias vacuolar sorting receptor (RMR) 0.02 SeedPlants
Zm00001e021893_P001 No alias vacuolar sorting receptor (RMR) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 218 261
IPR003137 PA_domain 58 125
No external refs found!