AT2G39810 (HOS1)


Aliases : HOS1

Description : ubiquitin-protein ligases


Gene families : OG_01_0006002 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006002_tree ,
OG_02_0005926 (LandPlants) Phylogenetic Tree(s): OG_02_0005926_tree ,
OG_03_0005716 (SeedPlants) Phylogenetic Tree(s): OG_03_0005716_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G39810
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Cre16.g683437 No alias No description available 0.05 Archaeplastida
GSVIVT01005813001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.14 Archaeplastida
LOC_Os03g52700.1 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.07 Archaeplastida
MA_10431906g0010 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.08 Archaeplastida
MA_573521g0010 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.05 Archaeplastida
MA_79296g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp7g02710.1 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida
Solyc08g078320.3.1 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.12 Archaeplastida
Zm00001e005599_P002 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida
Zm00001e012079_P002 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.05 Archaeplastida
GSVIVT01005813001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.12 LandPlants
LOC_Os03g52700.1 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.07 LandPlants
MA_10431906g0010 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.06 LandPlants
MA_573521g0010 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
Mp7g02710.1 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
Solyc08g078320.3.1 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.12 LandPlants
Zm00001e012079_P002 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.05 LandPlants
GSVIVT01005813001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.11 SeedPlants
LOC_Os03g52700.1 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.07 SeedPlants
MA_10431906g0010 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.07 SeedPlants
MA_573521g0010 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.02 SeedPlants
Solyc08g078320.3.1 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.12 SeedPlants
Zm00001e005599_P002 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.01 SeedPlants
Zm00001e012079_P002 No alias ELYS scaffold nucleoporin of nuclear pore complex 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0006306 DNA methylation RCA Interproscan
BP GO:0006342 chromatin silencing RCA Interproscan
BP GO:0006346 DNA methylation-dependent heterochromatin assembly RCA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated RCA Interproscan
BP GO:0007267 cell-cell signaling RCA Interproscan
BP GO:0009409 response to cold IMP Interproscan
BP GO:0009616 RNAi-mediated antiviral immune response RCA Interproscan
BP GO:0009640 photomorphogenesis RCA Interproscan
BP GO:0009793 embryo development ending in seed dormancy RCA Interproscan
BP GO:0009845 seed germination RCA Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0009933 meristem structural organization RCA Interproscan
BP GO:0010162 seed dormancy process RCA Interproscan
BP GO:0010182 sugar mediated signaling pathway RCA Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
BP GO:0010267 production of ta-siRNAs involved in RNA interference RCA Interproscan
BP GO:0016246 RNA interference RCA Interproscan
BP GO:0016567 protein ubiquitination IDA Interproscan
BP GO:0016567 protein ubiquitination IMP Interproscan
BP GO:0016567 protein ubiquitination RCA Interproscan
BP GO:0016571 histone methylation RCA Interproscan
BP GO:0016579 protein deubiquitination RCA Interproscan
BP GO:0019915 lipid storage RCA Interproscan
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA RCA Interproscan
BP GO:0043687 post-translational protein modification RCA Interproscan
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Interproscan
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Interproscan
BP GO:0050826 response to freezing RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025151 ELYS_dom 324 595
No external refs found!