GSVIVT01033691001


Description : Cell wall.cell wall proteins.expansins.alpha-type expansin


Gene families : OG_01_0000024 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000024_tree ,
OG_02_0114799 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0093050 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033691001
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00103570 evm_27.TU.AmTr_v1... Expansin-A4 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00140p00077570 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.07 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.03 Archaeplastida
AT1G26770 ATEXPA10,... expansin A10 0.02 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.05 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.06 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.04 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.04 Archaeplastida
AT4G38210 ATEXPA20,... expansin A20 0.02 Archaeplastida
AT5G39270 EXPA22, ATEXP22,... expansin A22 0.03 Archaeplastida
AT5G39280 ATHEXP ALPHA ... expansin A23 0.04 Archaeplastida
AT5G39300 ATEXPA25,... expansin A25 0.03 Archaeplastida
AT5G39310 EXPA24, ATEXP24,... expansin A24 0.03 Archaeplastida
Cre14.g631950 No alias No description available 0.01 Archaeplastida
GSVIVT01008762001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01025509001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
GSVIVT01029411001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Gb_11024 No alias Expansin-A10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os01g60770.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g16809.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g51040.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06020.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os05g19600.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os06g41700.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os08g44790.1 No alias alpha-class expansin 0.15 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os12g36040.1 No alias alpha-class expansin 0.09 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10434805g0030 No alias alpha-class expansin 0.02 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_274624g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.04 Archaeplastida
MA_651027g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_6583g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_70880g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_792493g0010 No alias alpha-class expansin 0.04 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g22720.1 No alias Expansin-A4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g22730.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.05 Archaeplastida
Mp1g26350.1 No alias alpha-class expansin 0.07 Archaeplastida
Mp2g18600.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g03930.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09760.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g10160.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g22690.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.05 Archaeplastida
Mp4g22180.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp5g20420.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp8g18860.1 No alias alpha-class expansin 0.03 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.06 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c14_18030V3.1 No alias expansin A14 0.04 Archaeplastida
Pp3c14_18450V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.04 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.03 Archaeplastida
Pp3c21_1850V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c21_1940V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.04 Archaeplastida
Pp3c3_16280V3.1 No alias expansin A14 0.06 Archaeplastida
Pp3c8_13450V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c8_13470V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c8_14900V3.1 No alias expansin A14 0.05 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.08 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Smo419575 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo90332 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo90935 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Solyc01g010890.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc03g115270.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc03g115300.2.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc06g049050.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc06g051800.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc09g010860.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e003887_P001 No alias alpha-class expansin 0.09 Archaeplastida
Zm00001e003888_P001 No alias alpha-class expansin 0.1 Archaeplastida
Zm00001e003889_P001 No alias alpha-class expansin 0.11 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e010388_P001 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e041376_P001 No alias alpha-class expansin 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 150 232
IPR007117 Expansin_CBD 243 321
No external refs found!