GSVIVT01033442001


Description : RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.CCR4 deadenylase component


Gene families : OG_01_0003309 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003309_tree ,
OG_02_0004039 (LandPlants) Phylogenetic Tree(s): OG_02_0004039_tree ,
OG_03_0006519 (SeedPlants) Phylogenetic Tree(s): OG_03_0006519_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033442001
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT3G58560 No alias DNAse I-like superfamily protein 0.03 Archaeplastida
AT3G58580 No alias DNAse I-like superfamily protein 0.05 Archaeplastida
Cpa|evm.model.tig00000342.20 No alias RNA processing.RNA decay.deadenylation-dependent... 0.01 Archaeplastida
Cre11.g475900 No alias RNA processing.RNA decay.deadenylation-dependent... 0.02 Archaeplastida
Gb_27365 No alias deadenylase component CCR4 of CCR4-NOT complex 0.04 Archaeplastida
LOC_Os03g07080.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.04 Archaeplastida
LOC_Os10g27230.3 No alias deadenylase component CCR4 of CCR4-NOT complex 0.04 Archaeplastida
MA_58111g0010 No alias Carbon catabolite repressor protein 4 homolog 1... 0.04 Archaeplastida
Mp1g17770.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.04 Archaeplastida
Pp3c23_22040V3.1 No alias DNAse I-like superfamily protein 0.02 Archaeplastida
Pp3c24_20740V3.1 No alias DNAse I-like superfamily protein 0.05 Archaeplastida
AT3G58560 No alias DNAse I-like superfamily protein 0.03 LandPlants
AT3G58580 No alias DNAse I-like superfamily protein 0.03 LandPlants
Gb_27365 No alias deadenylase component CCR4 of CCR4-NOT complex 0.04 LandPlants
LOC_Os03g07080.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.04 LandPlants
LOC_Os10g27230.3 No alias deadenylase component CCR4 of CCR4-NOT complex 0.04 LandPlants
Mp1g17770.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.03 LandPlants
Pp3c24_20740V3.1 No alias DNAse I-like superfamily protein 0.03 LandPlants
AT3G58560 No alias DNAse I-like superfamily protein 0.03 SeedPlants
AT3G58580 No alias DNAse I-like superfamily protein 0.03 SeedPlants
Gb_27365 No alias deadenylase component CCR4 of CCR4-NOT complex 0.04 SeedPlants
LOC_Os03g07080.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.04 SeedPlants
LOC_Os10g27230.3 No alias deadenylase component CCR4 of CCR4-NOT complex 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 256 588
IPR031615 Zfn-C6H2 72 110
No external refs found!