GSVIVT01033428001


Description : Spliceosome-associated protein 130 A OS=Arabidopsis thaliana


Gene families : OG_01_0005984 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005984_tree ,
OG_02_0007787 (LandPlants) Phylogenetic Tree(s): OG_02_0007787_tree ,
OG_03_0008854 (SeedPlants) Phylogenetic Tree(s): OG_03_0008854_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033428001
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AT3G11960 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.06 Archaeplastida
Gb_25386 No alias Spliceosome-associated protein 130 A OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os07g10390.1 No alias DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_10432916g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_129261g0030 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_20031g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8503923g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c24_19520V3.1 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.02 Archaeplastida
Smo448595 No alias DNA damage-binding protein 1a OS=Arabidopsis thaliana 0.06 Archaeplastida
Solyc10g080630.2.1 No alias Spliceosome-associated protein 130 A OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e033071_P001 No alias DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.1 Archaeplastida
AT3G11960 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.06 LandPlants
Gb_25386 No alias Spliceosome-associated protein 130 A OS=Arabidopsis... 0.02 LandPlants
LOC_Os07g10390.1 No alias DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.05 LandPlants
MA_10432916g0010 No alias no hits & (original description: none) 0.04 LandPlants
MA_129261g0030 No alias no hits & (original description: none) 0.02 LandPlants
Smo448595 No alias DNA damage-binding protein 1a OS=Arabidopsis thaliana 0.06 LandPlants
Solyc10g080630.2.1 No alias Spliceosome-associated protein 130 A OS=Arabidopsis... 0.07 LandPlants
Zm00001e033071_P001 No alias DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.09 LandPlants
AMTR_s00002p00260810 evm_27.TU.AmTr_v1... DNA damage-binding protein 1 OS=Oryza sativa subsp. japonica 0.02 SeedPlants
AT3G11960 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.05 SeedPlants
Gb_25386 No alias Spliceosome-associated protein 130 A OS=Arabidopsis... 0.02 SeedPlants
LOC_Os07g10390.1 No alias DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.03 SeedPlants
MA_10432916g0010 No alias no hits & (original description: none) 0.04 SeedPlants
Solyc10g080630.2.1 No alias Spliceosome-associated protein 130 A OS=Arabidopsis... 0.07 SeedPlants
Zm00001e033071_P001 No alias DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.08 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004871 Cleavage/polyA-sp_fac_asu_C 1055 1314
No external refs found!