GSVIVT01033156001

Description : Solute transport.channels.GLR ligand-gated cation channel

Gene families : OG_01_0000085 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000085_tree ,
OG_02_0000261 (LandPlants) Phylogenetic Tree(s): OG_02_0000261_tree ,
OG_03_0000114 (SeedPlants) Phylogenetic Tree(s): OG_03_0000114_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01033156001
Cluster	HCCA: Cluster_182

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00178690	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00019p00179820	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
AMTR_s00019p00180640	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00019p00180760	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00019p00184790	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00021p00176450	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AT1G42540	GLR3.3, ATGLR3.3	glutamate receptor 3.3	0.04	Archaeplastida
AT2G24710	GLR2.3, ATGLR2.3	glutamate receptor 2.3	0.03	Archaeplastida
AT2G24720	GLR2.2, ATGLR2.2	glutamate receptor 2.2	0.04	Archaeplastida
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.04	Archaeplastida
AT2G32400	GLR3.7, ATGLR3.7, GLR5	glutamate receptor 5	0.05	Archaeplastida
AT4G31710	GLR2.4, ATGLR2.4	glutamate receptor 2.4	0.02	Archaeplastida
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.03	Archaeplastida
AT5G11210	GLR2.5, ATGLR2.5	glutamate receptor 2.5	0.03	Archaeplastida
GSVIVT01030600001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01030602001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
Gb_01114	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Gb_26917	No alias	ligand-gated cation channel (GLR)	0.05	Archaeplastida
Gb_27767	No alias	ligand-gated cation channel (GLR)	0.05	Archaeplastida
LOC_Os04g49570.2	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
LOC_Os07g01310.1	No alias	ligand-gated cation channel (GLR)	0.05	Archaeplastida
LOC_Os09g26144.1	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
MA_110963g0010	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_141267g0010	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_23282g0010	No alias	ligand-gated cation channel (GLR)	0.07	Archaeplastida
MA_391859g0010	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_85337g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
Smo92810	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
Solyc06g063170.3.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Solyc06g063210.3.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Solyc07g052400.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Zm00001e009847_P001	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Zm00001e009848_P001	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Zm00001e016082_P001	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
AMTR_s00019p00178690	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.02	LandPlants
AMTR_s00019p00182630	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.02	LandPlants
AMTR_s00019p00184790	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.01	LandPlants
AT2G24710	GLR2.3, ATGLR2.3	glutamate receptor 2.3	0.03	LandPlants
AT2G24720	GLR2.2, ATGLR2.2	glutamate receptor 2.2	0.04	LandPlants
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.02	LandPlants
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.03	LandPlants
Gb_26917	No alias	ligand-gated cation channel (GLR)	0.05	LandPlants
Solyc06g063210.3.1	No alias	ligand-gated cation channel (GLR)	0.02	LandPlants
Zm00001e009848_P001	No alias	ligand-gated cation channel (GLR)	0.04	LandPlants
AMTR_s00019p00178690	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.02	SeedPlants
AMTR_s00019p00179820	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.01	SeedPlants
AMTR_s00019p00180760	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.01	SeedPlants
AMTR_s00019p00184790	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.01	SeedPlants
AT2G24710	GLR2.3, ATGLR2.3	glutamate receptor 2.3	0.03	SeedPlants
AT2G24720	GLR2.2, ATGLR2.2	glutamate receptor 2.2	0.04	SeedPlants
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.02	SeedPlants
AT4G31710	GLR2.4, ATGLR2.4	glutamate receptor 2.4	0.01	SeedPlants
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.01	SeedPlants
Gb_26917	No alias	ligand-gated cation channel (GLR)	0.05	SeedPlants
Solyc06g063180.3.1	No alias	ligand-gated cation channel (GLR)	0.01	SeedPlants
Solyc06g063190.3.1	No alias	ligand-gated cation channel (GLR)	0.01	SeedPlants
Solyc06g063210.3.1	No alias	ligand-gated cation channel (GLR)	0.02	SeedPlants
Zm00001e009848_P001	No alias	ligand-gated cation channel (GLR)	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	487	812
IPR001828	ANF_lig-bd_rcpt	53	403
IPR001320	Iontro_rcpt	813	843

External Links

No external refs found!

GSVIVT01033156001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation