GSVIVT01032986001

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component

Gene families : OG_01_0000257 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000257_tree ,
OG_02_0003698 (LandPlants) Phylogenetic Tree(s): OG_02_0003698_tree ,
OG_03_0004446 (SeedPlants) Phylogenetic Tree(s): OG_03_0004446_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01032986001
Cluster	HCCA: Cluster_211

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00104700	evm_27.TU.AmTr_v1...	Chromatin organisation.histone modifications.histone...	0.02	Archaeplastida
AMTR_s00069p00076340	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.1...	0.02	Archaeplastida
LOC_Os05g41172.2	No alias	class V/Su(var) histone methyltransferase component of...	0.03	Archaeplastida
LOC_Os08g45130.1	No alias	class V/Su(var) histone methyltransferase component of...	0.02	Archaeplastida
MA_279935g0010	No alias	class V/Su(var) histone methyltransferase component of...	0.03	Archaeplastida
Mp7g02350.1	No alias	Histone-lysine N-methyltransferase family member SUVH2...	0.02	Archaeplastida
Pp3c4_9720V3.1	No alias	SU(VAR)3-9 homolog 4	0.02	Archaeplastida
Solyc09g082050.4.1	No alias	class V/Su(var) histone methyltransferase component of...	0.04	Archaeplastida
Solyc09g090810.3.1	No alias	class V/Su(var) histone methyltransferase component of...	0.04	Archaeplastida
Solyc12g096990.2.1	No alias	class V/Su(var) histone methyltransferase component of...	0.02	Archaeplastida
Zm00001e007370_P001	No alias	class V/Su(var) histone methyltransferase component of...	0.02	Archaeplastida
Zm00001e033130_P002	No alias	class V/Su(var) histone methyltransferase component of...	0.03	Archaeplastida
Zm00001e033383_P001	No alias	class V/Su(var) histone methyltransferase component of...	0.02	Archaeplastida
AT5G13960	SDG33, SUVH4, KYP	SU(VAR)3-9 homolog 4	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0008276	protein methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016278	lysine N-methyltransferase activity	None	Extended
MF	GO:0016279	protein-lysine N-methyltransferase activity	None	Extended
BP	GO:0016569	covalent chromatin modification	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034968	histone lysine methylation	IEA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042054	histone methyltransferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001214	SET_dom	537	671
IPR007728	Pre-SET_dom	417	518
IPR003105	SRA_YDG	227	387

External Links

No external refs found!

GSVIVT01032986001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation