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  5. AMTR_s00010p00117910

AMTR_s00010p00117910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.72

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG_01_0000097 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000097_tree ,
OG_02_0000048 (LandPlants) Phylogenetic Tree(s): OG_02_0000048_tree ,
OG_03_0000021 (SeedPlants) Phylogenetic Tree(s): OG_03_0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00117910
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00230750 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00010p00236250 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.06 Archaeplastida
AMTR_s00084p00087230 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AMTR_s00126p00036100 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AMTR_s01360p00009540 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
Gb_00751 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.05 Archaeplastida
Gb_15878 No alias transcription factor (mTERF) 0.05 Archaeplastida
Gb_26176 No alias transcription factor (mTERF) 0.05 Archaeplastida
LOC_Os02g51450.2 No alias transcription factor (mTERF) 0.05 Archaeplastida
LOC_Os05g33440.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os05g33460.2 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os05g34160.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os06g12110.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os07g24090.1 No alias transcription factor (mTERF) 0.06 Archaeplastida
LOC_Os11g14130.1 No alias transcription factor (mTERF) 0.08 Archaeplastida
MA_192398g0010 No alias transcription factor (mTERF) 0.04 Archaeplastida
MA_31885g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_92135g0010 No alias transcription factor (mTERF) 0.04 Archaeplastida
Pp3c4_13990V3.1 No alias Mitochondrial transcription termination factor family protein 0.03 Archaeplastida
Solyc02g082010.3.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Solyc04g011700.2.1 No alias transcription factor (mTERF) 0.05 Archaeplastida
Solyc04g051880.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.06 Archaeplastida
Zm00001e010589_P001 No alias transcription factor (mTERF) 0.05 Archaeplastida
Zm00001e022322_P001 No alias transcription factor (mTERF) 0.04 Archaeplastida
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.02 Archaeplastida
AMTR_s00010p00225250 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 LandPlants
AMTR_s00010p00225430 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 LandPlants
AMTR_s01360p00009540 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 LandPlants
Gb_00751 No alias transcription factor (mTERF) 0.03 LandPlants
Gb_12979 No alias transcription factor (mTERF) 0.03 LandPlants
Gb_12989 No alias transcription factor (mTERF) 0.03 LandPlants
Gb_15878 No alias transcription factor (mTERF) 0.04 LandPlants
Gb_26176 No alias transcription factor (mTERF) 0.03 LandPlants
Gb_26213 No alias transcription factor (mTERF) 0.03 LandPlants
LOC_Os05g33440.1 No alias transcription factor (mTERF) 0.02 LandPlants
LOC_Os05g34160.1 No alias transcription factor (mTERF) 0.02 LandPlants
LOC_Os06g12100.1 No alias transcription factor (mTERF) 0.02 LandPlants
LOC_Os06g12110.1 No alias transcription factor (mTERF) 0.03 LandPlants
LOC_Os07g24090.1 No alias transcription factor (mTERF) 0.04 LandPlants
LOC_Os11g14130.1 No alias transcription factor (mTERF) 0.06 LandPlants
MA_31885g0010 No alias transcription factor (mTERF) 0.03 LandPlants
Pp3c4_13990V3.1 No alias Mitochondrial transcription termination factor family protein 0.03 LandPlants
Smo444400 No alias RNA biosynthesis.organelle... 0.02 LandPlants
Solyc04g011700.2.1 No alias transcription factor (mTERF) 0.04 LandPlants
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.02 LandPlants
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.03 LandPlants
Zm00001e010589_P001 No alias transcription factor (mTERF) 0.02 LandPlants
Gb_12368 No alias transcription factor (mTERF) 0.02 SeedPlants
Gb_26176 No alias transcription factor (mTERF) 0.03 SeedPlants
LOC_Os07g24090.1 No alias transcription factor (mTERF) 0.03 SeedPlants
LOC_Os11g14130.1 No alias transcription factor (mTERF) 0.04 SeedPlants
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.03 SeedPlants
Zm00001e010589_P001 No alias transcription factor (mTERF) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003690 MTERF 102 196
No external refs found!