GSVIVT01032336001


Description : Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0008241 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008241_tree ,
OG_02_0006918 (LandPlants) Phylogenetic Tree(s): OG_02_0006918_tree ,
OG_03_0004713 (SeedPlants) Phylogenetic Tree(s): OG_03_0004713_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032336001
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Archaeplastida
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 Archaeplastida
Solyc04g008570.4.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 Archaeplastida
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 Archaeplastida
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 LandPlants
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 LandPlants
Solyc04g008570.4.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 LandPlants
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 LandPlants
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 SeedPlants
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 SeedPlants
Solyc04g008570.4.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 SeedPlants
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 317 350
IPR002885 Pentatricopeptide_repeat 359 389
IPR002885 Pentatricopeptide_repeat 468 493
IPR002885 Pentatricopeptide_repeat 192 214
IPR002885 Pentatricopeptide_repeat 220 248
IPR002885 Pentatricopeptide_repeat 391 440
No external refs found!