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  5. GSVIVT01032336001

GSVIVT01032336001


Description : Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0008241 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008241_tree ,
OG_02_0006918 (LandPlants) Phylogenetic Tree(s): OG_02_0006918_tree ,
OG_03_0004713 (SeedPlants) Phylogenetic Tree(s): OG_03_0004713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032336001
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Archaeplastida
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 Archaeplastida
Solyc04g008570.4.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 Archaeplastida
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 Archaeplastida
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 LandPlants
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 LandPlants
Solyc04g008570.4.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 LandPlants
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 LandPlants
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 SeedPlants
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 SeedPlants
Solyc04g008570.4.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 SeedPlants
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 317 350
IPR002885 Pentatricopeptide_repeat 359 389
IPR002885 Pentatricopeptide_repeat 468 493
IPR002885 Pentatricopeptide_repeat 192 214
IPR002885 Pentatricopeptide_repeat 220 248
IPR002885 Pentatricopeptide_repeat 391 440
No external refs found!