GSVIVT01028479001


Description : Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0002684 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002684_tree ,
OG_02_0008842 (LandPlants) Phylogenetic Tree(s): OG_02_0008842_tree ,
OG_03_0009438 (SeedPlants) Phylogenetic Tree(s): OG_03_0009438_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028479001
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT4G28740 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 Archaeplastida
LOC_Os01g25600.1 No alias LPA1 protein involved in PS-II assembly 0.03 Archaeplastida
LOC_Os04g42800.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.05 Archaeplastida
Pp3c12_5470V3.1 No alias No annotation 0.07 Archaeplastida
Solyc09g074880.4.1 No alias No annotation 0.03 Archaeplastida
Zm00001e017629_P003 No alias LPA1 protein involved in PS-II assembly 0.06 Archaeplastida
AT4G28740 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 LandPlants
LOC_Os04g42800.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.04 LandPlants
Pp3c12_5470V3.1 No alias No annotation 0.03 LandPlants
AMTR_s00039p00129550 evm_27.TU.AmTr_v1... Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 SeedPlants
AT4G28740 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 SeedPlants
LOC_Os04g42800.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.04 SeedPlants
MA_10430747g0010 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021883 LPA1-like 93 168
No external refs found!