GSVIVT01028474001


Description : Cell wall.cell wall proteins.expansins.alpha-type expansin


Gene families : OG_01_0000024 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000024_tree ,
OG_02_0000028 (LandPlants) Phylogenetic Tree(s): OG_02_0000028_tree ,
OG_03_0000041 (SeedPlants) Phylogenetic Tree(s): OG_03_0000041_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028474001
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
AMTR_s00072p00134750 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
AMTR_s00077p00063420 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00110p00103570 evm_27.TU.AmTr_v1... Expansin-A4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00140p00077570 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00168p00074090 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.04 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.04 Archaeplastida
AT3G29030 EXP5, ATHEXP... expansin A5 0.04 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.04 Archaeplastida
AT5G02260 EXP9, EXPA9,... expansin A9 0.02 Archaeplastida
AT5G05290 EXPA2, ATHEXP... expansin A2 0.04 Archaeplastida
AT5G39260 EXPA21, EXP21,... expansin A21 0.04 Archaeplastida
AT5G39270 EXPA22, ATEXP22,... expansin A22 0.03 Archaeplastida
AT5G39280 ATHEXP ALPHA ... expansin A23 0.03 Archaeplastida
AT5G39290 ATEXP26, ATHEXP... expansin A26 0.04 Archaeplastida
AT5G39300 ATEXPA25,... expansin A25 0.04 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
GSVIVT01024572001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01025509001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01030192001 No alias Expansin-A2 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01033691001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Gb_01500 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01502 No alias alpha-class expansin 0.03 Archaeplastida
Gb_04404 No alias alpha-class expansin 0.03 Archaeplastida
Gb_06127 No alias alpha-class expansin 0.04 Archaeplastida
Gb_07424 No alias alpha-class expansin 0.03 Archaeplastida
Gb_16008 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os02g16780.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g16839.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g51040.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os05g19570.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os06g41700.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os12g36040.1 No alias alpha-class expansin 0.03 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10429288g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_10434805g0030 No alias alpha-class expansin 0.03 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_275115g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_51645g0010 No alias Expansin-A1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_651027g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_6644365g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_915221g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_91602g0010 No alias Expansin-A2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp1g22720.1 No alias Expansin-A4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g22730.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g28890.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp2g18610.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g20420.1 No alias alpha-class expansin 0.03 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c13_8440V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c14_18450V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.04 Archaeplastida
Pp3c8_14900V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.03 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
Smo419575 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo90332 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.06 Archaeplastida
Solyc03g031840.3.1 No alias No annotation 0.04 Archaeplastida
Solyc03g115270.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc03g115300.2.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc03g115310.1.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc03g115320.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc03g115890.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc06g049050.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc07g063210.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc09g010860.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc09g018020.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004721_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e014231_P001 No alias Expansin-A13 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e014247_P001 No alias Expansin-A23 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.07 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.05 Archaeplastida
AMTR_s00001p00115760 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 LandPlants
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 LandPlants
AMTR_s00072p00134750 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 LandPlants
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.02 LandPlants
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.03 LandPlants
AT1G26770 ATEXPA10,... expansin A10 0.01 LandPlants
AT1G62980 EXPA18, EXP18,... expansin A18 0.02 LandPlants
AT2G40610 EXPA8, ATHEXP... expansin A8 0.03 LandPlants
AT3G29030 EXP5, ATHEXP... expansin A5 0.03 LandPlants
AT4G01630 ATHEXP ALPHA... expansin A17 0.02 LandPlants
AT5G02260 EXP9, EXPA9,... expansin A9 0.02 LandPlants
AT5G05290 EXPA2, ATHEXP... expansin A2 0.03 LandPlants
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 LandPlants
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 LandPlants
Gb_01500 No alias alpha-class expansin 0.03 LandPlants
Gb_01502 No alias alpha-class expansin 0.03 LandPlants
Gb_06127 No alias alpha-class expansin 0.02 LandPlants
Gb_07435 No alias alpha-class expansin 0.01 LandPlants
Gb_20678 No alias alpha-class expansin 0.02 LandPlants
LOC_Os01g14660.1 No alias alpha-class expansin 0.05 LandPlants
LOC_Os01g16770.1 No alias alpha-class expansin 0.03 LandPlants
LOC_Os02g16730.1 No alias alpha-class expansin 0.03 LandPlants
LOC_Os02g16780.1 No alias alpha-class expansin 0.01 LandPlants
LOC_Os02g16839.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os03g06000.1 No alias alpha-class expansin 0.03 LandPlants
LOC_Os03g06050.1 No alias alpha-class expansin 0.03 LandPlants
LOC_Os03g25990.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os03g31480.1 No alias alpha-class expansin 0.04 LandPlants
LOC_Os04g15840.1 No alias alpha-class expansin 0.05 LandPlants
LOC_Os10g30330.1 No alias alpha-class expansin 0.04 LandPlants
LOC_Os10g30340.1 No alias alpha-class expansin 0.04 LandPlants
LOC_Os10g39110.1 No alias alpha-class expansin 0.04 LandPlants
MA_103404g0010 No alias alpha-class expansin 0.01 LandPlants
MA_10429288g0010 No alias alpha-class expansin 0.01 LandPlants
MA_14588g0010 No alias alpha-class expansin 0.02 LandPlants
MA_18265g0010 No alias alpha-class expansin 0.02 LandPlants
MA_37884g0010 No alias alpha-class expansin 0.02 LandPlants
MA_474624g0010 No alias alpha-class expansin 0.02 LandPlants
MA_8784268g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_915221g0010 No alias alpha-class expansin 0.02 LandPlants
Mp1g28890.1 No alias alpha-class expansin 0.01 LandPlants
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 LandPlants
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 LandPlants
Solyc02g088100.3.1 No alias alpha-class expansin 0.04 LandPlants
Solyc03g115890.3.1 No alias alpha-class expansin 0.02 LandPlants
Solyc05g052250.3.1 No alias alpha-class expansin 0.02 LandPlants
Solyc06g049050.3.1 No alias alpha-class expansin 0.02 LandPlants
Solyc07g063210.3.1 No alias alpha-class expansin 0.01 LandPlants
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.03 LandPlants
Solyc08g080060.4.1 No alias alpha-class expansin 0.03 LandPlants
Solyc09g010860.4.1 No alias alpha-class expansin 0.02 LandPlants
Zm00001e000429_P001 No alias alpha-class expansin 0.02 LandPlants
Zm00001e004714_P001 No alias alpha-class expansin 0.03 LandPlants
Zm00001e017221_P001 No alias alpha-class expansin 0.02 LandPlants
Zm00001e017334_P001 No alias alpha-class expansin 0.04 LandPlants
Zm00001e038997_P001 No alias alpha-class expansin 0.02 LandPlants
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 SeedPlants
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.02 SeedPlants
AT1G26770 ATEXPA10,... expansin A10 0.01 SeedPlants
AT2G40610 EXPA8, ATHEXP... expansin A8 0.02 SeedPlants
AT5G02260 EXP9, EXPA9,... expansin A9 0.02 SeedPlants
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 SeedPlants
Gb_07424 No alias alpha-class expansin 0.01 SeedPlants
Gb_07435 No alias alpha-class expansin 0.01 SeedPlants
LOC_Os01g14660.1 No alias alpha-class expansin 0.03 SeedPlants
LOC_Os01g16770.1 No alias alpha-class expansin 0.01 SeedPlants
LOC_Os03g06000.1 No alias alpha-class expansin 0.01 SeedPlants
LOC_Os03g06050.1 No alias alpha-class expansin 0.02 SeedPlants
LOC_Os03g31480.1 No alias alpha-class expansin 0.02 SeedPlants
LOC_Os04g15840.1 No alias alpha-class expansin 0.02 SeedPlants
LOC_Os10g30330.1 No alias alpha-class expansin 0.02 SeedPlants
LOC_Os10g30340.1 No alias alpha-class expansin 0.02 SeedPlants
MA_103404g0010 No alias alpha-class expansin 0.01 SeedPlants
MA_10429288g0010 No alias alpha-class expansin 0.01 SeedPlants
MA_14588g0010 No alias alpha-class expansin 0.02 SeedPlants
MA_18265g0010 No alias alpha-class expansin 0.02 SeedPlants
MA_37884g0010 No alias alpha-class expansin 0.02 SeedPlants
MA_474624g0010 No alias alpha-class expansin 0.02 SeedPlants
Solyc02g088100.3.1 No alias alpha-class expansin 0.03 SeedPlants
Solyc03g115890.3.1 No alias alpha-class expansin 0.02 SeedPlants
Zm00001e000429_P001 No alias alpha-class expansin 0.01 SeedPlants
Zm00001e004714_P001 No alias alpha-class expansin 0.02 SeedPlants
Zm00001e017334_P001 No alias alpha-class expansin 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 150 226
IPR009009 RlpA-like_DPBB 55 138
No external refs found!