GSVIVT01028384001

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor

Gene families : OG_01_0000097 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000097_tree ,
OG_02_0000048 (LandPlants) Phylogenetic Tree(s): OG_02_0000048_tree ,
OG_03_0000021 (SeedPlants) Phylogenetic Tree(s): OG_03_0000021_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01028384001
Cluster	HCCA: Cluster_208

Target	Alias	Description	ECC score	Gene Family Method
MA_31885g0010	No alias	transcription factor (mTERF)	0.04	Archaeplastida
MA_31885g0010	No alias	transcription factor (mTERF)	0.04	LandPlants
Smo410501	No alias	RNA biosynthesis.organelle...	0.02	LandPlants
LOC_Os06g12110.1	No alias	transcription factor (mTERF)	0.01	SeedPlants
LOC_Os11g10000.1	No alias	transcription factor (mTERF)	0.02	SeedPlants
LOC_Os11g10040.1	No alias	transcription factor (mTERF)	0.02	SeedPlants
MA_31885g0010	No alias	transcription factor (mTERF)	0.04	SeedPlants
Solyc02g082010.3.1	No alias	transcription factor (mTERF)	0.02	SeedPlants
Solyc04g072490.4.1	No alias	EPF/EPFL precursor polypeptide. transcription factor (mTERF)	0.05	SeedPlants
Solyc11g022600.2.1	No alias	transcription factor (mTERF)	0.05	SeedPlants
Solyc12g010650.1.1	No alias	transcription factor (mTERF). component DSP2 of DSP...	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003690	MTERF	61	279
IPR003690	MTERF	190	333

External Links

No external refs found!

GSVIVT01028384001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation