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  5. GSVIVT01028238001

GSVIVT01028238001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028238001
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.04 Archaeplastida
GSVIVT01028516001 No alias External stimuli response.light.red/far red light.PIF... 0.03 Archaeplastida
Gb_30387 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_100071g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_29186g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c27_8050V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 Archaeplastida
Pp3c4_24380V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc07g043580.4.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
AMTR_s00106p00127480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
AT1G27740 RSL4 root hair defective 6-like 4 0.02 LandPlants
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.02 LandPlants
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.07 LandPlants
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 LandPlants
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.02 LandPlants
GSVIVT01028516001 No alias External stimuli response.light.red/far red light.PIF... 0.03 LandPlants
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os04g52770.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.04 LandPlants
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.04 LandPlants
MA_100071g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_29186g0010 No alias no hits & (original description: none) 0.03 LandPlants
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 LandPlants
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.04 LandPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.04 LandPlants
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc04g007430.2.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc07g043580.4.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 LandPlants
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.04 LandPlants
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.02 LandPlants
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.02 SeedPlants
Gb_30387 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.03 SeedPlants
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.03 SeedPlants
LOC_Os12g41650.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.01 SeedPlants
MA_100071g0010 No alias no hits & (original description: none) 0.01 SeedPlants
MA_29186g0010 No alias no hits & (original description: none) 0.03 SeedPlants
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.03 SeedPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.02 SeedPlants
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.02 SeedPlants
Solyc04g007430.2.1 No alias transcription factor (bHLH) 0.02 SeedPlants
Solyc07g043580.4.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 SeedPlants
Zm00001e017430_P001 No alias transcription factor (bHLH) 0.01 SeedPlants
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.02 SeedPlants
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 19 64
No external refs found!