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  5. GSVIVT01028192001

GSVIVT01028192001


Description : RNA biosynthesis.transcriptional activation.DBP transcription factor


Gene families : OG_01_0000802 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000802_tree ,
OG_02_0009795 (LandPlants) Phylogenetic Tree(s): OG_02_0009795_tree ,
OG_03_0007014 (SeedPlants) Phylogenetic Tree(s): OG_03_0007014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028192001
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00195190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.DBP... 0.08 Archaeplastida
AT3G62260 No alias Protein phosphatase 2C family protein 0.07 Archaeplastida
Gb_16142 No alias transcription factor (DBP). clade G phosphatase 0.08 Archaeplastida
LOC_Os01g19130.1 No alias transcription factor (DBP) 0.05 Archaeplastida
MA_16483g0010 No alias transcription factor (DBP) 0.04 Archaeplastida
MA_185497g0010 No alias transcription factor (DBP). clade G phosphatase 0.03 Archaeplastida
Pp3c2_10660V3.1 No alias Protein phosphatase 2C family protein 0.04 Archaeplastida
Pp3c6_3580V3.1 No alias DNA-binding protein phosphatase 1 0.03 Archaeplastida
Solyc01g068000.4.1 No alias transcription factor (DBP) 0.14 Archaeplastida
Solyc05g053290.3.1 No alias transcription factor (DBP) 0.03 Archaeplastida
Solyc06g009390.3.1 No alias transcription factor (DBP) 0.05 Archaeplastida
Zm00001e025432_P001 No alias transcription factor (DBP) 0.06 Archaeplastida
Zm00001e040337_P001 No alias transcription factor (DBP) 0.05 Archaeplastida
AMTR_s00003p00195190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.DBP... 0.06 LandPlants
AT3G62260 No alias Protein phosphatase 2C family protein 0.07 LandPlants
LOC_Os01g19130.1 No alias transcription factor (DBP) 0.03 LandPlants
Solyc01g068000.4.1 No alias transcription factor (DBP) 0.11 LandPlants
Solyc06g009390.3.1 No alias transcription factor (DBP) 0.03 LandPlants
Zm00001e025432_P001 No alias transcription factor (DBP) 0.05 LandPlants
Zm00001e040337_P001 No alias transcription factor (DBP) 0.02 LandPlants
AMTR_s00003p00195190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.DBP... 0.05 SeedPlants
AT3G62260 No alias Protein phosphatase 2C family protein 0.06 SeedPlants
Solyc01g068000.4.1 No alias transcription factor (DBP) 0.1 SeedPlants
Solyc06g009390.3.1 No alias transcription factor (DBP) 0.03 SeedPlants
Zm00001e025432_P001 No alias transcription factor (DBP) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 95 347
No external refs found!