GSVIVT01027441001


Description : 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris


Gene families : OG_01_0010997 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010997_tree ,
OG_02_0010955 (LandPlants) Phylogenetic Tree(s): OG_02_0010955_tree ,
OG_03_0010931 (SeedPlants) Phylogenetic Tree(s): OG_03_0010931_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027441001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00087410 evm_27.TU.AmTr_v1... 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris 0.06 Archaeplastida
AT1G01080 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.25 Archaeplastida
Gb_28108 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.07 Archaeplastida
LOC_Os08g02390.1 No alias 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia... 0.17 Archaeplastida
MA_136464g0010 No alias 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.05 Archaeplastida
MA_482994g0010 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.07 Archaeplastida
Zm00001e029208_P001 No alias 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.13 Archaeplastida
AMTR_s00100p00087410 evm_27.TU.AmTr_v1... 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris 0.06 LandPlants
AT1G01080 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.24 LandPlants
Gb_28108 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.07 LandPlants
LOC_Os08g02390.1 No alias 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia... 0.17 LandPlants
MA_136464g0010 No alias 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.05 LandPlants
MA_482994g0010 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.05 LandPlants
Zm00001e029208_P001 No alias 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.12 LandPlants
AMTR_s00100p00087410 evm_27.TU.AmTr_v1... 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris 0.06 SeedPlants
AT1G01080 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.24 SeedPlants
Gb_28108 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.07 SeedPlants
LOC_Os08g02390.1 No alias 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia... 0.17 SeedPlants
MA_136464g0010 No alias 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.05 SeedPlants
MA_482994g0010 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.05 SeedPlants
Zm00001e029208_P001 No alias 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.12 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 1 54
IPR000504 RRM_dom 87 155
No external refs found!