AT2G35160 (SUVH5, SGD9)


Aliases : SUVH5, SGD9

Description : SU(VAR)3-9 homolog 5


Gene families : OG_01_0000257 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000257_tree ,
OG_02_0001628 (LandPlants) Phylogenetic Tree(s): OG_02_0001628_tree ,
OG_03_0001153 (SeedPlants) Phylogenetic Tree(s): OG_03_0001153_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G35160
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Gb_31631 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
LOC_Os01g59620.1 No alias class V/Su(var) histone methyltransferase component of... 0.05 Archaeplastida
LOC_Os05g41172.2 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
Solyc03g093700.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
Zm00001e019503_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e028400_P002 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_95753g0010 No alias class V/Su(var) histone methyltransferase component of... 0.02 LandPlants
MA_95753g0010 No alias class V/Su(var) histone methyltransferase component of... 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006346 DNA methylation-dependent heterochromatin assembly RCA Interproscan
BP GO:0007062 sister chromatid cohesion RCA Interproscan
BP GO:0009640 photomorphogenesis RCA Interproscan
BP GO:0010200 response to chitin IEP Interproscan
BP GO:0010216 maintenance of DNA methylation IGI Interproscan
BP GO:0016567 protein ubiquitination RCA Interproscan
BP GO:0016571 histone methylation IDA Interproscan
BP GO:0016571 histone methylation RCA Interproscan
BP GO:0016579 protein deubiquitination RCA Interproscan
BP GO:0031048 heterochromatin assembly by small RNA IEP Interproscan
BP GO:0031048 heterochromatin assembly by small RNA RCA Interproscan
BP GO:0040029 regulation of gene expression, epigenetic TAS Interproscan
MF GO:0042054 histone methyltransferase activity IDA Interproscan
MF GO:0042054 histone methyltransferase activity ISS Interproscan
BP GO:0045132 meiotic chromosome segregation RCA Interproscan
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001214 SET_dom 658 764
IPR003105 SRA_YDG 364 519
IPR007728 Pre-SET_dom 544 639
No external refs found!