GSVIVT01026450001


Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.ERCC6 chromatin remodeling factor


Gene families : OG_01_0004952 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004952_tree ,
OG_02_0005405 (LandPlants) Phylogenetic Tree(s): OG_02_0005405_tree ,
OG_03_0005202 (SeedPlants) Phylogenetic Tree(s): OG_03_0005202_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026450001
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT5G63950 CHR24 chromatin remodeling 24 0.09 Archaeplastida
Cpa|evm.model.tig00000441.21 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cpa|evm.model.tig00001292.5 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_17075 No alias chromatin remodeling factor (ERCC6) 0.05 Archaeplastida
LOC_Os04g59624.2 No alias chromatin remodeling factor (ERCC6) 0.05 Archaeplastida
MA_18372g0010 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Mp1g29760.1 No alias chromatin remodeling factor (ERCC6) 0.05 Archaeplastida
Pp3c14_20620V3.1 No alias chromatin remodeling 24 0.05 Archaeplastida
Pp3c2_11030V3.1 No alias chromatin remodeling 24 0.04 Archaeplastida
Solyc01g068280.3.1 No alias chromatin remodeling factor (ERCC6) 0.1 Archaeplastida
Zm00001e007521_P001 No alias chromatin remodeling factor (ERCC6) 0.08 Archaeplastida
AT5G63950 CHR24 chromatin remodeling 24 0.09 LandPlants
Gb_17075 No alias chromatin remodeling factor (ERCC6) 0.05 LandPlants
LOC_Os04g59624.2 No alias chromatin remodeling factor (ERCC6) 0.04 LandPlants
MA_18372g0010 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana... 0.06 LandPlants
Mp1g29760.1 No alias chromatin remodeling factor (ERCC6) 0.05 LandPlants
Pp3c14_20620V3.1 No alias chromatin remodeling 24 0.05 LandPlants
Pp3c2_11030V3.1 No alias chromatin remodeling 24 0.04 LandPlants
Solyc01g068280.3.1 No alias chromatin remodeling factor (ERCC6) 0.12 LandPlants
Zm00001e007521_P001 No alias chromatin remodeling factor (ERCC6) 0.06 LandPlants
AT5G63950 CHR24 chromatin remodeling 24 0.09 SeedPlants
Gb_17075 No alias chromatin remodeling factor (ERCC6) 0.06 SeedPlants
LOC_Os04g59624.2 No alias chromatin remodeling factor (ERCC6) 0.04 SeedPlants
MA_18372g0010 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana... 0.04 SeedPlants
Solyc01g068280.3.1 No alias chromatin remodeling factor (ERCC6) 0.12 SeedPlants
Zm00001e007521_P001 No alias chromatin remodeling factor (ERCC6) 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000330 SNF2_dom 343 635
IPR001650 Helicase_C 688 800
No external refs found!