AT2G34430 (LHCB1.4, LHB1B1)


Aliases : LHCB1.4, LHB1B1

Description : light-harvesting chlorophyll-protein complex II subunit B1


Gene families : OG_01_0000035 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000035_tree ,
OG_02_0000162 (LandPlants) Phylogenetic Tree(s): OG_02_0000162_tree ,
OG_03_0000359 (SeedPlants) Phylogenetic Tree(s): OG_03_0000359_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G34430
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
AMTR_s00045p00069220 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.06 Archaeplastida
AMTR_s00131p00114510 evm_27.TU.AmTr_v1... Photosystem I chlorophyll a/b-binding protein 6,... 0.02 Archaeplastida
Cre01.g066917 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Cre03.g156900 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Cre04.g232104 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Cre06.g278213 No alias Chlorophyll a-b binding protein P4, chloroplastic... 0.02 Archaeplastida
Cre10.g425900 No alias Chlorophyll a-b binding protein 4, chloroplastic... 0.02 Archaeplastida
Cre10.g452050 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 Archaeplastida
Cre12.g548400 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Cre17.g720250 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
GSVIVT01007988001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 Archaeplastida
GSVIVT01014439001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 Archaeplastida
GSVIVT01016295001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 Archaeplastida
GSVIVT01029789001 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Gb_32082 No alias component LHCa2 of LHC-I complex 0.02 Archaeplastida
LOC_Os02g10390.1 No alias component LHCa3 of LHC-I complex 0.03 Archaeplastida
LOC_Os06g21590.1 No alias component LHCa1 of LHC-I complex 0.03 Archaeplastida
LOC_Os07g37240.1 No alias component LHCb4 of LHC-II complex 0.04 Archaeplastida
LOC_Os07g37550.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
LOC_Os08g33820.1 No alias component LHCa4 of LHC-I complex 0.04 Archaeplastida
LOC_Os09g12540.1 No alias component LHCq of LHC-II complex 0.03 Archaeplastida
LOC_Os09g17740.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
MA_10431300g0020 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
MA_97315g0010 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g06710.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Pp3c5_7150V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida
Pp3c5_7180V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida
Pp3c6_22090V3.1 No alias photosystem I light harvesting complex gene 3 0.02 Archaeplastida
Solyc01g105030.3.1 No alias component LHCb6 of LHC-II complex 0.06 Archaeplastida
Solyc01g105050.3.1 No alias component LHCb6 of LHC-II complex 0.06 Archaeplastida
Solyc02g070940.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.08 Archaeplastida
Solyc02g070950.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 Archaeplastida
Solyc02g070980.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Solyc02g070990.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Solyc02g071000.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Solyc02g071010.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.08 Archaeplastida
Solyc02g071030.2.1 No alias component LHCb1/2/3 of LHC-II complex 0.06 Archaeplastida
Solyc03g005760.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.07 Archaeplastida
Solyc03g005770.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.07 Archaeplastida
Solyc03g115900.4.1 No alias component LHCa4 of LHC-I complex 0.03 Archaeplastida
Solyc05g056050.3.1 No alias component LHCa1 of LHC-I complex 0.05 Archaeplastida
Solyc06g063370.3.1 No alias component LHCb5 of LHC-II complex 0.03 Archaeplastida
Solyc06g069730.3.1 No alias component LHCa4 of LHC-I complex 0.05 Archaeplastida
Solyc07g047850.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Solyc07g063600.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.06 Archaeplastida
Solyc08g067330.1.1 No alias Chlorophyll a-b binding protein 16, chloroplastic... 0.03 Archaeplastida
Solyc09g014520.3.1 No alias component LHCb4 of LHC-II complex 0.03 Archaeplastida
Solyc10g006230.3.1 No alias component LHCa2 of LHC-I complex 0.03 Archaeplastida
Solyc10g007690.3.1 No alias component LHCa3 of LHC-I complex 0.03 Archaeplastida
Solyc12g011280.2.1 No alias component LHCa3 of LHC-I complex 0.06 Archaeplastida
Solyc12g011450.2.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Zm00001e006561_P001 No alias component LHCb6 of LHC-II complex 0.02 Archaeplastida
Zm00001e011045_P002 No alias component LHCb5 of LHC-II complex 0.03 Archaeplastida
Zm00001e032450_P001 No alias Chlorophyll a-b binding protein, chloroplastic OS=Zea... 0.02 Archaeplastida
Zm00001e041918_P001 No alias component LHCb6 of LHC-II complex 0.02 Archaeplastida
AMTR_s00006p00251360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 LandPlants
AMTR_s00045p00069900 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.04 LandPlants
AMTR_s00088p00153020 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.04 LandPlants
AMTR_s00153p00078810 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 LandPlants
AMTR_s00189p00032350 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 LandPlants
GSVIVT01014439001 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 LandPlants
GSVIVT01020858001 No alias Chlorophyll a-b binding protein 40, chloroplastic... 0.05 LandPlants
GSVIVT01021405001 No alias Chlorophyll a-b binding protein 21, chloroplastic... 0.06 LandPlants
GSVIVT01030053001 No alias Chlorophyll a-b binding protein 151, chloroplastic... 0.04 LandPlants
LOC_Os01g41710.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 LandPlants
LOC_Os03g39610.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 LandPlants
LOC_Os07g37550.1 No alias component LHCb1/2/3 of LHC-II complex 0.06 LandPlants
LOC_Os09g17740.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 LandPlants
MA_10431300g0010 No alias Chlorophyll a-b binding protein type I, chloroplastic... 0.04 LandPlants
MA_10431300g0020 No alias component LHCb1/2/3 of LHC-II complex 0.03 LandPlants
MA_131587g0010 No alias component LHCb1/2/3 of LHC-II complex 0.02 LandPlants
MA_97315g0010 No alias component LHCb1/2/3 of LHC-II complex 0.03 LandPlants
Mp1g29620.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 LandPlants
Mp7g05880.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 LandPlants
Mp7g05890.1 No alias component LHCb1/2/3 of LHC-II complex 0.07 LandPlants
Mp7g06710.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 LandPlants
Mp7g06720.1 No alias component LHCb1/2/3 of LHC-II complex 0.07 LandPlants
Mp7g06730.1 No alias component LHCb1/2/3 of LHC-II complex 0.06 LandPlants
Mp7g06760.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 LandPlants
Mp7g06780.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 LandPlants
Mp7g06790.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 LandPlants
Mp7g08940.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 LandPlants
Mp7g09180.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 LandPlants
Pp3c10_3020V3.1 No alias photosystem II light harvesting complex gene 2.3 0.02 LandPlants
Pp3c13_5930V3.1 No alias photosystem II light harvesting complex gene 2.1 0.05 LandPlants
Pp3c13_7900V3.1 No alias photosystem II light harvesting complex gene 2.1 0.05 LandPlants
Pp3c18_8100V3.1 No alias photosystem II light harvesting complex gene 2.1 0.05 LandPlants
Pp3c19_20900V3.1 No alias light-harvesting chlorophyll B-binding protein 3 0.06 LandPlants
Pp3c21_3950V3.1 No alias photosystem II light harvesting complex gene 2.1 0.06 LandPlants
Pp3c22_5610V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 LandPlants
Pp3c26_6740V3.1 No alias photosystem II light harvesting complex gene 2.1 0.05 LandPlants
Pp3c2_35930V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 LandPlants
Pp3c2_36190V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 LandPlants
Pp3c2_36220V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 LandPlants
Pp3c2_36380V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 LandPlants
Pp3c2_36500V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 LandPlants
Pp3c2_36570V3.1 No alias photosystem II light harvesting complex gene 2.1 0.04 LandPlants
Pp3c3_4100V3.1 No alias photosystem II light harvesting complex gene 2.1 0.04 LandPlants
Pp3c5_7150V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 LandPlants
Pp3c5_7180V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 LandPlants
Smo407444 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 LandPlants
Solyc02g070940.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.13 LandPlants
Solyc02g070950.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.11 LandPlants
Solyc02g070970.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.07 LandPlants
Solyc02g070980.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.1 LandPlants
Solyc02g070990.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.07 LandPlants
Solyc02g071000.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.1 LandPlants
Solyc02g071010.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.13 LandPlants
Solyc02g071030.2.1 No alias component LHCb1/2/3 of LHC-II complex 0.12 LandPlants
Solyc03g005760.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.12 LandPlants
Solyc03g005770.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.12 LandPlants
Solyc03g005780.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.09 LandPlants
Solyc07g047850.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.09 LandPlants
Solyc07g063600.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.11 LandPlants
Solyc08g067320.3.1 No alias Chlorophyll a-b binding protein 3A, chloroplastic... 0.05 LandPlants
Solyc08g067330.1.1 No alias Chlorophyll a-b binding protein 16, chloroplastic... 0.03 LandPlants
Solyc12g006140.2.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 LandPlants
Solyc12g011450.2.1 No alias component LHCb1/2/3 of LHC-II complex 0.08 LandPlants
Zm00001e004940_P001 No alias component LHCb1/2/3 of LHC-II complex 0.03 LandPlants
Zm00001e004941_P001 No alias component LHCb1/2/3 of LHC-II complex 0.03 LandPlants
Zm00001e020627_P001 No alias component LHCb1/2/3 of LHC-II complex 0.05 LandPlants
Zm00001e026547_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e034922_P001 No alias Chlorophyll a-b binding protein 1, chloroplastic OS=Zea... 0.04 LandPlants
Zm00001e035249_P001 No alias component LHCb1/2/3 of LHC-II complex 0.04 LandPlants
AMTR_s00003p00136650 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 SeedPlants
AMTR_s00006p00251360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.04 SeedPlants
AMTR_s00045p00069900 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.05 SeedPlants
AMTR_s00088p00153020 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.04 SeedPlants
AMTR_s00189p00032350 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.04 SeedPlants
GSVIVT01030053001 No alias Chlorophyll a-b binding protein 151, chloroplastic... 0.05 SeedPlants
Gb_05853 No alias component LHCb1/2/3 of LHC-II complex 0.02 SeedPlants
LOC_Os01g41710.1 No alias component LHCb1/2/3 of LHC-II complex 0.06 SeedPlants
LOC_Os03g39610.1 No alias component LHCb1/2/3 of LHC-II complex 0.06 SeedPlants
LOC_Os09g17740.1 No alias component LHCb1/2/3 of LHC-II complex 0.06 SeedPlants
MA_10431300g0020 No alias component LHCb1/2/3 of LHC-II complex 0.03 SeedPlants
MA_131587g0010 No alias component LHCb1/2/3 of LHC-II complex 0.02 SeedPlants
MA_97315g0010 No alias component LHCb1/2/3 of LHC-II complex 0.03 SeedPlants
Solyc02g070940.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.14 SeedPlants
Solyc02g070950.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.12 SeedPlants
Solyc02g070970.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.09 SeedPlants
Solyc02g070980.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.09 SeedPlants
Solyc02g070990.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.07 SeedPlants
Solyc02g071000.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.11 SeedPlants
Solyc02g071010.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.14 SeedPlants
Solyc02g071030.2.1 No alias component LHCb1/2/3 of LHC-II complex 0.13 SeedPlants
Solyc03g005760.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.11 SeedPlants
Solyc03g005770.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.13 SeedPlants
Solyc03g005780.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.1 SeedPlants
Solyc07g047850.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.1 SeedPlants
Solyc08g067330.1.1 No alias Chlorophyll a-b binding protein 16, chloroplastic... 0.02 SeedPlants
Solyc12g006140.2.1 No alias component LHCb1/2/3 of LHC-II complex 0.07 SeedPlants
Zm00001e004940_P001 No alias component LHCb1/2/3 of LHC-II complex 0.04 SeedPlants
Zm00001e004941_P001 No alias component LHCb1/2/3 of LHC-II complex 0.04 SeedPlants
Zm00001e020627_P001 No alias component LHCb1/2/3 of LHC-II complex 0.06 SeedPlants
Zm00001e026547_P001 No alias no hits & (original description: none) 0.04 SeedPlants
Zm00001e034922_P001 No alias Chlorophyll a-b binding protein 1, chloroplastic OS=Zea... 0.05 SeedPlants

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
BP GO:0009769 photosynthesis, light harvesting in photosystem II TAS Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
CC GO:0010287 plastoglobule IDA Interproscan
BP GO:0015979 photosynthesis ISS Interproscan
CC GO:0016020 membrane IDA Interproscan
MF GO:0016168 chlorophyll binding ISS Interproscan
MF GO:0016168 chlorophyll binding TAS Interproscan
CC GO:0030076 light-harvesting complex ISS Interproscan
CC GO:0042651 thylakoid membrane TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 65 232
No external refs found!