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  5. AT2G34280

AT2G34280


Description : F-box and associated interaction domains-containing protein


Gene families : OG_01_0008123 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008123_tree ,
OG_02_0006729 (LandPlants) Phylogenetic Tree(s): OG_02_0006729_tree ,
OG_03_0004262 (SeedPlants) Phylogenetic Tree(s): OG_03_0004262_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G34280
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT1G71320 No alias F-box family protein 0.06 Archaeplastida
AT3G62350 No alias BEST Arabidopsis thaliana protein match is: F-box family... 0.06 Archaeplastida
AT3G62380 No alias CONTAINS InterPro DOMAIN/s: F-box associated interaction... 0.02 Archaeplastida
AT4G01640 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT1G71320 No alias F-box family protein 0.05 LandPlants
AT3G62350 No alias BEST Arabidopsis thaliana protein match is: F-box family... 0.05 LandPlants
AT3G62380 No alias CONTAINS InterPro DOMAIN/s: F-box associated interaction... 0.02 LandPlants
AT1G71320 No alias F-box family protein 0.05 SeedPlants
AT3G62350 No alias BEST Arabidopsis thaliana protein match is: F-box family... 0.05 SeedPlants
AT3G62380 No alias CONTAINS InterPro DOMAIN/s: F-box associated interaction... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 235 330
IPR001810 F-box_dom 3 36
No external refs found!