Cre12.g529500


Description : 29.2.2.3.3 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases FtsJ-like methyltransferase family protein


Gene families : OG_01_0003762 (Gene family) Phylogenetic Tree(s): OG0003762_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre12.g529500
Cluster HCCA cluster: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT4G25730 No alias FtsJ-like methyltransferase family protein 0.24 Gene family
Cpa|evm.model.tig00000217.16 No alias 29.2.2.3.3 protein.synthesis.ribosome... 0.02 Gene family
GSVIVT01023801001 No alias 29.2.2.3.3 protein.synthesis.ribosome... 0.16 Gene family
LOC_Os05g49230 Os05g0567400 29.2.2.3.3 protein.synthesis.ribosome... 0.06 Gene family
MA_10429557g0010 No alias 29.2.2.3.3 protein.synthesis.ribosome... 0.03 Gene family
Smo141188 PACid_15407353 No description available 0.02 Gene family
Smo404107 PACid_15407688 No description available 0.07 Gene family
Smo78506 PACid_15422107 No description available 0.02 Gene family
Solyc11g020810.2.1 Solyc11g020810.2 29.2.2.3.3 protein.synthesis.ribosome... 0.19 Gene family
Solyc11g020820.2.1 Solyc11g020820.2 29.2.2.3.3 protein.synthesis.ribosome... 0.01 Gene family
Zm00001d009597 GRMZM2G158091 29.2.2.3.3 protein.synthesis.ribosome... 0.04 Gene family
Zm00001d039047 GRMZM2G128579 29.2.2.3.3 protein.synthesis.ribosome... 0.19 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006364 rRNA processing IEA InterProScan
MF GO:0008168 methyltransferase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002877 rRNA_MeTrfase_FtsJ_dom 23 199
IPR024576 rRNA_MeTfrase_Spb1_DUF3381 237 418
IPR012920 rRNA_MeTfrase_Spb1_C 678 878
No external refs found!