GSVIVT01025009001


Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component


Gene families : OG_01_0001027 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001027_tree ,
OG_02_0000803 (LandPlants) Phylogenetic Tree(s): OG_02_0000803_tree ,
OG_03_0000994 (SeedPlants) Phylogenetic Tree(s): OG_03_0000994_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025009001
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00035940 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.04 Archaeplastida
LOC_Os08g33120.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 Archaeplastida
MA_102122g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c25_13340V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
Smo402061 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
Solyc10g086400.2.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 Archaeplastida
Zm00001e033165_P001 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.06 Archaeplastida
AMTR_s00012p00035940 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.05 LandPlants
Gb_18965 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 LandPlants
Gb_33262 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 LandPlants
LOC_Os08g33120.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 LandPlants
MA_102122g0010 No alias no hits & (original description: none) 0.04 LandPlants
Pp3c25_13340V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 LandPlants
Pp3c6_2570V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 LandPlants
Zm00001e033165_P001 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.06 LandPlants
AMTR_s00012p00035940 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.05 SeedPlants
Gb_04102 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 SeedPlants
Gb_18965 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 SeedPlants
Gb_33262 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 SeedPlants
LOC_Os08g33120.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 SeedPlants
MA_102122g0010 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 89 157
IPR025715 FoP_C 179 238
No external refs found!