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  5. GSVIVT01024986001

GSVIVT01024986001


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor


Gene families : OG_01_0000060 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000060_tree ,
OG_02_0000025 (LandPlants) Phylogenetic Tree(s): OG_02_0000025_tree ,
OG_03_0000055 (SeedPlants) Phylogenetic Tree(s): OG_03_0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024986001
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G29160 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT2G28510 No alias Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT3G55370 OBP3 OBF-binding protein 3 0.03 Archaeplastida
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.07 Archaeplastida
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01016887001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01021212001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
Gb_12877 No alias transcription factor (DOF) 0.02 Archaeplastida
Gb_20867 No alias Cyclic dof factor 3 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_23561 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g07360.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os05g02150.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_16692g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_18267g0010 No alias transcription factor (DOF) 0.11 Archaeplastida
MA_2430g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_248613g0010 No alias No annotation 0.03 Archaeplastida
MA_459791g0010 No alias transcription factor (DOF) 0.04 Archaeplastida
MA_56828g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_74014g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c13_2000V3.1 No alias cycling DOF factor 3 0.03 Archaeplastida
Pp3c16_6460V3.1 No alias cycling DOF factor 2 0.02 Archaeplastida
Pp3c17_3860V3.1 No alias OBF binding protein 4 0.01 Archaeplastida
Solyc02g077960.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g115940.4.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e004809_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e006527_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e012824_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e027411_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 LandPlants
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.02 LandPlants
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.04 LandPlants
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.03 LandPlants
AT3G55370 OBP3 OBF-binding protein 3 0.03 LandPlants
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.02 LandPlants
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.04 LandPlants
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.03 LandPlants
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.03 LandPlants
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 LandPlants
GSVIVT01021212001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 LandPlants
GSVIVT01038591001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 LandPlants
Gb_12877 No alias transcription factor (DOF) 0.02 LandPlants
Gb_20867 No alias Cyclic dof factor 3 OS=Arabidopsis thaliana... 0.06 LandPlants
Gb_23561 No alias transcription factor (DOF) 0.05 LandPlants
LOC_Os01g09720.1 No alias transcription factor (DOF) 0.02 LandPlants
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.02 LandPlants
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.01 LandPlants
LOC_Os03g07360.1 No alias transcription factor (DOF) 0.03 LandPlants
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.03 LandPlants
LOC_Os04g58190.1 No alias transcription factor (DOF) 0.01 LandPlants
LOC_Os05g02150.1 No alias transcription factor (DOF) 0.01 LandPlants
LOC_Os05g36900.1 No alias transcription factor (DOF) 0.01 LandPlants
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.02 LandPlants
LOC_Os10g26620.1 No alias transcription factor (DOF) 0.02 LandPlants
MA_18267g0010 No alias transcription factor (DOF) 0.07 LandPlants
MA_459791g0010 No alias transcription factor (DOF) 0.02 LandPlants
Mp1g18540.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc03g115940.4.1 No alias transcription factor (DOF) 0.03 LandPlants
Solyc08g082910.2.1 No alias transcription factor (DOF) 0.02 LandPlants
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.05 LandPlants
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.04 LandPlants
Zm00001e000526_P001 No alias transcription factor (DOF) 0.01 LandPlants
Zm00001e004809_P001 No alias transcription factor (DOF) 0.03 LandPlants
Zm00001e005107_P001 No alias transcription factor (DOF) 0.02 LandPlants
Zm00001e006527_P001 No alias transcription factor (DOF) 0.06 LandPlants
Zm00001e012824_P001 No alias transcription factor (DOF) 0.02 LandPlants
Zm00001e015414_P004 No alias transcription factor (DOF) 0.02 LandPlants
Zm00001e019172_P001 No alias transcription factor (DOF) 0.02 LandPlants
Zm00001e023218_P004 No alias transcription factor (DOF) 0.04 LandPlants
Zm00001e035074_P001 No alias transcription factor (DOF) 0.01 LandPlants
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 SeedPlants
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 SeedPlants
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.02 SeedPlants
AT3G55370 OBP3 OBF-binding protein 3 0.03 SeedPlants
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.02 SeedPlants
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.02 SeedPlants
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.03 SeedPlants
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.03 SeedPlants
GSVIVT01038591001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 SeedPlants
Gb_12877 No alias transcription factor (DOF) 0.02 SeedPlants
LOC_Os01g09720.1 No alias transcription factor (DOF) 0.02 SeedPlants
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.01 SeedPlants
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.03 SeedPlants
LOC_Os04g58190.1 No alias transcription factor (DOF) 0.01 SeedPlants
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.02 SeedPlants
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.01 SeedPlants
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.01 SeedPlants
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.01 SeedPlants
Solyc08g082910.2.1 No alias transcription factor (DOF) 0.02 SeedPlants
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.05 SeedPlants
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.03 SeedPlants
Zm00001e006527_P001 No alias transcription factor (DOF) 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 64 120
No external refs found!