AT2G32650


Description : RmlC-like cupins superfamily protein


Gene families : OG_01_0001063 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001063_tree ,
OG_02_0006615 (LandPlants) Phylogenetic Tree(s): OG_02_0006615_tree ,
OG_03_0007610 (SeedPlants) Phylogenetic Tree(s): OG_03_0007610_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G32650
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030485001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.06 Archaeplastida
Gb_38487 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.05 Archaeplastida
LOC_Os02g54360.1 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.02 Archaeplastida
Mp7g08900.1 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.02 Archaeplastida
Pp3c20_2790V3.1 No alias plastid transcriptionally active 18 0.07 Archaeplastida
Solyc07g049230.1.1 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.25 Archaeplastida
GSVIVT01030485001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.06 LandPlants
Gb_38487 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.05 LandPlants
LOC_Os02g54360.1 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.02 LandPlants
Mp7g08900.1 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.02 LandPlants
Pp3c20_2790V3.1 No alias plastid transcriptionally active 18 0.07 LandPlants
Solyc07g049230.1.1 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.25 LandPlants
GSVIVT01030485001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.06 SeedPlants
Gb_38487 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.05 SeedPlants
LOC_Os02g54360.1 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.02 SeedPlants
Solyc07g049230.1.1 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.25 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008579 UGlyAH_Cupin_3_dom 57 129
No external refs found!