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  5. GSVIVT01023150001

GSVIVT01023150001


Description : Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis thaliana


Gene families : OG_01_0007012 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007012_tree ,
OG_02_0005443 (LandPlants) Phylogenetic Tree(s): OG_02_0005443_tree ,
OG_03_0006518 (SeedPlants) Phylogenetic Tree(s): OG_03_0006518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023150001
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g35150.1 No alias splicing factor (RGH3) 0.03 Archaeplastida
Mp8g15710.1 No alias splicing factor (RGH3) 0.02 Archaeplastida
Pp3c3_25240V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.07 Archaeplastida
Solyc01g103090.4.1 No alias splicing factor (RGH3) 0.07 Archaeplastida
Zm00001e014831_P001 No alias splicing factor (RGH3) 0.06 Archaeplastida
AMTR_s00099p00102890 evm_27.TU.AmTr_v1... Zinc finger CCCH domain-containing protein 5... 0.02 LandPlants
LOC_Os02g35150.1 No alias splicing factor (RGH3) 0.03 LandPlants
Pp3c3_25240V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.05 LandPlants
Solyc01g103090.4.1 No alias splicing factor (RGH3) 0.06 LandPlants
Zm00001e014831_P001 No alias splicing factor (RGH3) 0.05 LandPlants
AMTR_s00099p00102890 evm_27.TU.AmTr_v1... Zinc finger CCCH domain-containing protein 5... 0.02 SeedPlants
LOC_Os02g35150.1 No alias splicing factor (RGH3) 0.02 SeedPlants
Solyc01g103090.4.1 No alias splicing factor (RGH3) 0.06 SeedPlants
Zm00001e014831_P001 No alias splicing factor (RGH3) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 359 386
No external refs found!