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  5. GSVIVT01022480001

GSVIVT01022480001


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP1-group protein


Gene families : OG_01_0000372 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000372_tree ,
OG_02_0002991 (LandPlants) Phylogenetic Tree(s): OG_02_0002991_tree ,
OG_03_0004212 (SeedPlants) Phylogenetic Tree(s): OG_03_0004212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022480001
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AT3G11820 SYP121,... syntaxin of plants 121 0.03 Archaeplastida
AT3G52400 SYP122, ATSYP122 syntaxin of plants 122 0.03 Archaeplastida
Smo151097 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
LOC_Os07g07000.1 No alias SYP1-group Qa-type SNARE component 0.02 SeedPlants
Solyc07g052470.3.1 No alias SYP1-group Qa-type SNARE component 0.01 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 37 242
IPR000727 T_SNARE_dom 244 295
No external refs found!