GSVIVT01021552001


Description : RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor


Gene families : OG_01_0000080 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000080_tree ,
OG_02_0009308 (LandPlants) Phylogenetic Tree(s): OG_02_0009308_tree ,
OG_03_0012392 (SeedPlants) Phylogenetic Tree(s): OG_03_0012392_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021552001
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00157690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
AT1G19850 MP, IAA24, ARF5 Transcriptional factor B3 family protein /... 0.03 Archaeplastida
AT2G33860 ARF3, ETT Transcriptional factor B3 family protein /... 0.07 Archaeplastida
AT5G37020 ARF8, ATARF8 auxin response factor 8 0.06 Archaeplastida
AT5G60450 ARF4 auxin response factor 4 0.03 Archaeplastida
GSVIVT01011008001 No alias RNA biosynthesis.transcriptional activation.B3... 0.05 Archaeplastida
GSVIVT01025198001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
Gb_39685 No alias transcription factor (ARF) 0.03 Archaeplastida
Gb_39686 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os01g48060.1 No alias transcription factor (ARF) 0.04 Archaeplastida
LOC_Os04g36054.1 No alias transcription factor (ARF) 0.05 Archaeplastida
LOC_Os04g56850.1 No alias transcription factor (ARF) 0.05 Archaeplastida
LOC_Os05g43920.1 No alias transcription factor (ARF) 0.04 Archaeplastida
LOC_Os05g48870.1 No alias transcription factor (ARF) 0.03 Archaeplastida
MA_10432580g0010 No alias transcription factor (ARF) 0.06 Archaeplastida
Pp3c13_4720V3.1 No alias auxin response factor 6 0.03 Archaeplastida
Pp3c14_16990V3.1 No alias auxin response factor 6 0.04 Archaeplastida
Solyc01g096070.3.1 No alias transcription factor (ARF) 0.03 Archaeplastida
Solyc02g037530.3.1 No alias transcription factor (ARF) 0.06 Archaeplastida
Solyc02g077560.3.1 No alias transcription factor (ARF) 0.08 Archaeplastida
Solyc03g118290.3.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Solyc05g047460.3.1 No alias transcription factor (ARF) 0.05 Archaeplastida
Zm00001e003229_P002 No alias transcription factor (ARF) 0.06 Archaeplastida
Zm00001e006577_P003 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e006640_P002 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e014833_P002 No alias transcription factor (ARF) 0.05 Archaeplastida
Zm00001e016366_P002 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e018126_P002 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e021527_P006 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e028396_P001 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e030325_P003 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e041910_P003 No alias transcription factor (ARF) 0.04 Archaeplastida
Gb_39686 No alias transcription factor (ARF) 0.04 LandPlants
MA_85955g0010 No alias transcription factor (ARF) 0.03 LandPlants
Mp2g02890.1 No alias Auxin response factor 19 OS=Oryza sativa subsp. japonica... 0.02 LandPlants
Gb_39686 No alias transcription factor (ARF) 0.03 SeedPlants
MA_55076g0010 No alias transcription factor (ARF) 0.02 SeedPlants
Solyc07g043610.3.1 No alias transcription factor (ARF) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 73 116
No external refs found!