AT2G31270 (CDT1, ATCDT1A, CDT1A)


Aliases : CDT1, ATCDT1A, CDT1A

Description : homolog of yeast CDT1 A


Gene families : OG_01_0002838 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002838_tree ,
OG_02_0002106 (LandPlants) Phylogenetic Tree(s): OG_02_0002106_tree ,
OG_03_0001869 (SeedPlants) Phylogenetic Tree(s): OG_03_0001869_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G31270
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00068790 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.02 Archaeplastida
Cre03.g163300 No alias Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.04 Archaeplastida
GSVIVT01024251001 No alias Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.03 Archaeplastida
Gb_04601 No alias helicase auxiliary factor (CDT1) 0.04 Archaeplastida
Gb_39165 No alias helicase auxiliary factor (CDT1) 0.03 Archaeplastida
LOC_Os04g10650.1 No alias helicase auxiliary factor (CDT1) 0.05 Archaeplastida
LOC_Os10g34820.2 No alias helicase auxiliary factor (CDT1) 0.06 Archaeplastida
MA_9011g0010 No alias helicase auxiliary factor (CDT1) 0.05 Archaeplastida
Solyc03g019960.3.1 No alias helicase auxiliary factor (CDT1) 0.05 Archaeplastida
Solyc06g008510.3.1 No alias helicase auxiliary factor (CDT1) 0.03 Archaeplastida
Zm00001e004505_P001 No alias helicase auxiliary factor (CDT1) 0.05 Archaeplastida
Zm00001e006735_P001 No alias helicase auxiliary factor (CDT1) 0.02 Archaeplastida
Zm00001e041798_P001 No alias helicase auxiliary factor (CDT1) 0.06 Archaeplastida
AMTR_s00171p00068790 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.02 LandPlants
GSVIVT01024251001 No alias Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.03 LandPlants
LOC_Os04g10650.1 No alias helicase auxiliary factor (CDT1) 0.05 LandPlants
LOC_Os10g34820.2 No alias helicase auxiliary factor (CDT1) 0.05 LandPlants
MA_114779g0010 No alias helicase auxiliary factor (CDT1) 0.02 LandPlants
MA_9011g0010 No alias helicase auxiliary factor (CDT1) 0.03 LandPlants
Solyc03g019960.3.1 No alias helicase auxiliary factor (CDT1) 0.04 LandPlants
Solyc06g008510.3.1 No alias helicase auxiliary factor (CDT1) 0.03 LandPlants
Zm00001e004505_P001 No alias helicase auxiliary factor (CDT1) 0.03 LandPlants
Zm00001e006735_P001 No alias helicase auxiliary factor (CDT1) 0.02 LandPlants
Zm00001e041798_P001 No alias helicase auxiliary factor (CDT1) 0.06 LandPlants
GSVIVT01024251001 No alias Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.03 SeedPlants
Gb_39165 No alias helicase auxiliary factor (CDT1) 0.01 SeedPlants
LOC_Os04g10650.1 No alias helicase auxiliary factor (CDT1) 0.05 SeedPlants
LOC_Os10g34820.2 No alias helicase auxiliary factor (CDT1) 0.05 SeedPlants
MA_114779g0010 No alias helicase auxiliary factor (CDT1) 0.02 SeedPlants
MA_9011g0010 No alias helicase auxiliary factor (CDT1) 0.03 SeedPlants
Solyc03g019960.3.1 No alias helicase auxiliary factor (CDT1) 0.04 SeedPlants
Solyc06g008510.3.1 No alias helicase auxiliary factor (CDT1) 0.03 SeedPlants
Zm00001e004505_P001 No alias helicase auxiliary factor (CDT1) 0.03 SeedPlants
Zm00001e006735_P001 No alias helicase auxiliary factor (CDT1) 0.02 SeedPlants
Zm00001e041798_P001 No alias helicase auxiliary factor (CDT1) 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006084 acetyl-CoA metabolic process RCA Interproscan
BP GO:0006260 DNA replication IMP Interproscan
BP GO:0006261 DNA-dependent DNA replication RCA Interproscan
BP GO:0006270 DNA replication initiation RCA Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0006342 chromatin silencing RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
BP GO:0009658 chloroplast organization IMP Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle RCA Interproscan
BP GO:0016458 gene silencing RCA Interproscan
BP GO:0016572 histone phosphorylation RCA Interproscan
MF GO:0019901 protein kinase binding IPI Interproscan
BP GO:0034968 histone lysine methylation RCA Interproscan
BP GO:0048229 gametophyte development IMP Interproscan
BP GO:0051276 chromosome organization IMP Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
BP GO:0051726 regulation of cell cycle RCA Interproscan
MF GO:0070182 DNA polymerase binding IPI Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032054 Cdt1_C 443 536
IPR014939 CDT1_Gemini-bd-like 111 230
No external refs found!