GSVIVT01021074001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG_01_0000509 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000509_tree ,
OG_02_0000283 (LandPlants) Phylogenetic Tree(s): OG_02_0000283_tree ,
OG_03_0009573 (SeedPlants) Phylogenetic Tree(s): OG_03_0009573_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021074001
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00081740 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00089p00043950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G72210 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G46810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01009097001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_17233 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_21105 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os02g15760.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os02g46560.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os04g50090.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os09g29360.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_57244g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_686524g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c22_14220V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Smo91359 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc03g007410.4.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc05g053660.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc09g091760.3.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc12g087850.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e000161_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e003394_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e014279_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e023271_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e024824_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e037075_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e041403_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
AMTR_s00025p00081740 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
AT2G46810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
GSVIVT01009097001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
Gb_17233 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os02g15760.1 No alias transcription factor (bHLH) 0.04 LandPlants
LOC_Os02g46560.1 No alias transcription factor (bHLH) 0.04 LandPlants
MA_686524g0010 No alias transcription factor (bHLH) 0.02 LandPlants
Pp3c22_14220V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
Smo91359 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
Solyc01g098720.3.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc03g007410.4.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc05g053660.3.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc09g091760.3.1 No alias transcription factor (bHLH) 0.04 LandPlants
Zm00001e000161_P002 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e023271_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e024824_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc05g053660.3.1 No alias transcription factor (bHLH) 0.03 SeedPlants
Solyc09g091760.3.1 No alias transcription factor (bHLH) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 163 214
No external refs found!