AT2G30780

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_01_0007652 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007652_tree ,
OG_02_0006373 (LandPlants) Phylogenetic Tree(s): OG_02_0006373_tree ,
OG_03_0006424 (SeedPlants) Phylogenetic Tree(s): OG_03_0006424_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G30780
Cluster	HCCA: Cluster_120

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01011040001	No alias	Pentatricopeptide repeat-containing protein At2g30780...	0.03	Archaeplastida
LOC_Os05g33760.1	No alias	Pentatricopeptide repeat-containing protein At2g30780...	0.03	Archaeplastida
MA_898819g0010	No alias	Pentatricopeptide repeat-containing protein At2g30780...	0.02	Archaeplastida
Solyc07g053060.3.1	No alias	Pentatricopeptide repeat-containing protein At2g30780...	0.04	Archaeplastida
Zm00001e031648_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
AMTR_s00197p00040880	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At2g30780...	0.02	LandPlants
GSVIVT01011040001	No alias	Pentatricopeptide repeat-containing protein At2g30780...	0.03	LandPlants
Gb_15165	No alias	Pentatricopeptide repeat-containing protein At2g30780...	0.02	LandPlants
MA_898819g0010	No alias	Pentatricopeptide repeat-containing protein At2g30780...	0.02	LandPlants
Solyc07g053060.3.1	No alias	Pentatricopeptide repeat-containing protein At2g30780...	0.04	LandPlants
Zm00001e031648_P001	No alias	no hits & (original description: none)	0.03	LandPlants
LOC_Os05g33760.1	No alias	Pentatricopeptide repeat-containing protein At2g30780...	0.02	SeedPlants
MA_898819g0010	No alias	Pentatricopeptide repeat-containing protein At2g30780...	0.02	SeedPlants
Solyc07g053060.3.1	No alias	Pentatricopeptide repeat-containing protein At2g30780...	0.04	SeedPlants
Zm00001e031648_P001	No alias	no hits & (original description: none)	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	139	182
IPR002885	Pentatricopeptide_repeat	207	256
IPR002885	Pentatricopeptide_repeat	423	452

External Links

No external refs found!