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  5. GSVIVT01019663001

GSVIVT01019663001


Description : Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG_01_0001228 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001228_tree ,
OG_02_0002282 (LandPlants) Phylogenetic Tree(s): OG_02_0002282_tree ,
OG_03_0003035 (SeedPlants) Phylogenetic Tree(s): OG_03_0003035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019663001
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00255680 evm_27.TU.AmTr_v1... Beta-carotene isomerase D27, chloroplastic... 0.05 Archaeplastida
AT1G64680 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.08 Archaeplastida
AT4G01995 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 Archaeplastida
LOC_Os08g02210.2 No alias Beta-carotene isomerase D27, chloroplastic... 0.07 Archaeplastida
MA_167711g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_18999g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c26_11090V3.1 No alias No annotation 0.05 Archaeplastida
Solyc06g084610.4.1 No alias Beta-carotene isomerase D27, chloroplastic... 0.04 Archaeplastida
Solyc08g008630.4.1 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.07 Archaeplastida
Zm00001e029191_P001 No alias Beta-carotene isomerase D27, chloroplastic... 0.06 Archaeplastida
AMTR_s00018p00255680 evm_27.TU.AmTr_v1... Beta-carotene isomerase D27, chloroplastic... 0.04 LandPlants
AT1G64680 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 LandPlants
LOC_Os08g02210.2 No alias Beta-carotene isomerase D27, chloroplastic... 0.06 LandPlants
MA_18999g0010 No alias no hits & (original description: none) 0.05 LandPlants
Pp3c26_11090V3.1 No alias No annotation 0.05 LandPlants
Solyc08g008630.4.1 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.05 LandPlants
Zm00001e029191_P001 No alias Beta-carotene isomerase D27, chloroplastic... 0.05 LandPlants
AMTR_s00018p00255680 evm_27.TU.AmTr_v1... Beta-carotene isomerase D27, chloroplastic... 0.04 SeedPlants
AT1G64680 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 SeedPlants
LOC_Os08g02210.2 No alias Beta-carotene isomerase D27, chloroplastic... 0.05 SeedPlants
MA_18999g0010 No alias no hits & (original description: none) 0.05 SeedPlants
Solyc08g008630.4.1 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.05 SeedPlants
Zm00001e029191_P001 No alias Beta-carotene isomerase D27, chloroplastic... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025114 D27-like_C 47 129
No external refs found!