GSVIVT01019043001

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor

Gene families : OG_01_0000236 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000236_tree ,
OG_02_0000141 (LandPlants) Phylogenetic Tree(s): OG_02_0000141_tree ,
OG_03_0001991 (SeedPlants) Phylogenetic Tree(s): OG_03_0001991_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01019043001
Cluster	HCCA: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00262320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
AMTR_s00002p00243900	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
AMTR_s00059p00164750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
AMTR_s00165p00052010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
AT1G75410	BLH3	BEL1-like homeodomain 3	0.04	Archaeplastida
AT2G27990	BLH8, PNF	BEL1-like homeodomain 8	0.03	Archaeplastida
AT5G02030	VAN, BLH9, RPL,...	POX (plant homeobox) family protein	0.03	Archaeplastida
AT5G41410	BEL1	POX (plant homeobox) family protein	0.03	Archaeplastida
Gb_15916	No alias	transcription factor (BEL)	0.02	Archaeplastida
Gb_22513	No alias	transcription factor (BEL)	0.02	Archaeplastida
LOC_Os03g06930.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
LOC_Os10g39030.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
LOC_Os11g06020.1	No alias	transcription factor (BEL)	0.02	Archaeplastida
MA_28447g0010	No alias	transcription factor (BEL)	0.05	Archaeplastida
MA_6763g0010	No alias	transcription factor (BEL)	0.03	Archaeplastida
Pp3c13_7150V3.1	No alias	BEL1-like homeodomain 6	0.02	Archaeplastida
Pp3c15_11880V3.1	No alias	BEL1-like homeodomain 7	0.02	Archaeplastida
Solyc02g065490.4.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
Solyc02g089940.4.1	No alias	transcription factor (BEL)	0.02	Archaeplastida
Solyc04g079830.2.1	No alias	transcription factor (BEL)	0.06	Archaeplastida
Solyc06g074120.3.1	No alias	transcription factor (BEL)	0.02	Archaeplastida
Solyc08g081400.4.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
Zm00001e000177_P001	No alias	transcription factor (BEL)	0.06	Archaeplastida
Zm00001e002206_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e005579_P001	No alias	transcription factor (BEL)	0.03	Archaeplastida
Zm00001e012282_P002	No alias	transcription factor (BEL)	0.02	Archaeplastida
Zm00001e024626_P004	No alias	transcription factor (BEL)	0.03	Archaeplastida
Zm00001e026923_P002	No alias	transcription factor (BEL)	0.03	Archaeplastida
Zm00001e029812_P001	No alias	transcription factor (BEL)	0.02	Archaeplastida
AMTR_s00001p00262320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	LandPlants
AMTR_s00002p00243900	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.04	LandPlants
AMTR_s00059p00164750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.04	LandPlants
AT1G75410	BLH3	BEL1-like homeodomain 3	0.03	LandPlants
AT5G02030	VAN, BLH9, RPL,...	POX (plant homeobox) family protein	0.03	LandPlants
AT5G41410	BEL1	POX (plant homeobox) family protein	0.03	LandPlants
LOC_Os03g06930.1	No alias	transcription factor (BEL)	0.02	LandPlants
LOC_Os10g39030.1	No alias	transcription factor (BEL)	0.02	LandPlants
MA_28447g0010	No alias	transcription factor (BEL)	0.02	LandPlants
MA_6763g0010	No alias	transcription factor (BEL)	0.02	LandPlants
Solyc02g089940.4.1	No alias	transcription factor (BEL)	0.02	LandPlants
Solyc04g079830.2.1	No alias	transcription factor (BEL)	0.05	LandPlants
Solyc06g074120.3.1	No alias	transcription factor (BEL)	0.02	LandPlants
Solyc08g081400.4.1	No alias	transcription factor (BEL)	0.03	LandPlants
Zm00001e000177_P001	No alias	transcription factor (BEL)	0.04	LandPlants
Zm00001e002206_P001	No alias	no hits & (original description: none)	0.02	LandPlants
Zm00001e005579_P001	No alias	transcription factor (BEL)	0.02	LandPlants
Zm00001e026923_P002	No alias	transcription factor (BEL)	0.02	LandPlants
AMTR_s00001p00262320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.02	SeedPlants
AMTR_s00059p00164750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	SeedPlants
AT5G41410	BEL1	POX (plant homeobox) family protein	0.02	SeedPlants
Gb_15916	No alias	transcription factor (BEL)	0.02	SeedPlants
LOC_Os10g39030.1	No alias	transcription factor (BEL)	0.02	SeedPlants
MA_28447g0010	No alias	transcription factor (BEL)	0.02	SeedPlants
Solyc02g089940.4.1	No alias	transcription factor (BEL)	0.02	SeedPlants
Solyc04g079830.2.1	No alias	transcription factor (BEL)	0.04	SeedPlants
Solyc08g081400.4.1	No alias	transcription factor (BEL)	0.02	SeedPlants
Zm00001e000177_P001	No alias	transcription factor (BEL)	0.03	SeedPlants
Zm00001e002206_P001	No alias	no hits & (original description: none)	0.02	SeedPlants
Zm00001e005579_P001	No alias	transcription factor (BEL)	0.02	SeedPlants
Zm00001e029812_P001	No alias	transcription factor (BEL)	0.01	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	485	524
IPR006563	POX_dom	263	415

External Links

No external refs found!

GSVIVT01019043001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation