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  5. GSVIVT01019000001

GSVIVT01019000001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG_01_0000200 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000200_tree ,
OG_02_0000106 (LandPlants) Phylogenetic Tree(s): OG_02_0000106_tree ,
OG_03_0000058 (SeedPlants) Phylogenetic Tree(s): OG_03_0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019000001
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT1G68130 IDD14, AtIDD14 indeterminate(ID)-domain 14 0.05 Archaeplastida
AT3G13810 IDD11, AtIDD11 indeterminate(ID)-domain 11 0.06 Archaeplastida
GSVIVT01010961001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
LOC_Os01g39110.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g10140.1 No alias C2H2 zinc finger transcription factor. elicitor peptide... 0.04 Archaeplastida
Mp2g24110.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc01g099340.3.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc02g062940.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e026143_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
AMTR_s00059p00106830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 LandPlants
AT1G68130 IDD14, AtIDD14 indeterminate(ID)-domain 14 0.05 LandPlants
AT3G13810 IDD11, AtIDD11 indeterminate(ID)-domain 11 0.04 LandPlants
LOC_Os03g10140.1 No alias C2H2 zinc finger transcription factor. elicitor peptide... 0.03 LandPlants
MA_10431498g0010 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Mp2g24110.1 No alias C2H2 zinc finger transcription factor 0.04 LandPlants
Solyc01g099340.3.1 No alias C2H2 zinc finger transcription factor 0.05 LandPlants
AMTR_s00059p00106830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 SeedPlants
AT1G68130 IDD14, AtIDD14 indeterminate(ID)-domain 14 0.05 SeedPlants
AT3G13810 IDD11, AtIDD11 indeterminate(ID)-domain 11 0.04 SeedPlants
LOC_Os03g10140.1 No alias C2H2 zinc finger transcription factor. elicitor peptide... 0.03 SeedPlants
LOC_Os09g38340.1 No alias C2H2 zinc finger transcription factor 0.02 SeedPlants
Solyc01g099340.3.1 No alias C2H2 zinc finger transcription factor 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 66 88
No external refs found!