GSVIVT01018981001


Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).U1-70K snRNP component


Gene families : OG_01_0004474 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004474_tree ,
OG_02_0005029 (LandPlants) Phylogenetic Tree(s): OG_02_0005029_tree ,
OG_03_0007211 (SeedPlants) Phylogenetic Tree(s): OG_03_0007211_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018981001
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Cre16.g656250 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
Pp3c11_26490V3.1 No alias U1 small nuclear ribonucleoprotein-70K 0.02 Archaeplastida
Pp3c7_6390V3.1 No alias U1 small nuclear ribonucleoprotein-70K 0.03 Archaeplastida
Smo58751 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 Archaeplastida
Solyc02g085420.4.1 No alias component U1-70K of U1 small nuclear ribonucleoprotein... 0.06 Archaeplastida
Zm00001e012949_P002 No alias component U1-70K of U1 small nuclear ribonucleoprotein... 0.1 Archaeplastida
Pp3c11_26490V3.1 No alias U1 small nuclear ribonucleoprotein-70K 0.02 LandPlants
Pp3c7_6390V3.1 No alias U1 small nuclear ribonucleoprotein-70K 0.03 LandPlants
Smo58751 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 LandPlants
Solyc02g085420.4.1 No alias component U1-70K of U1 small nuclear ribonucleoprotein... 0.06 LandPlants
Zm00001e012949_P002 No alias component U1-70K of U1 small nuclear ribonucleoprotein... 0.09 LandPlants
Solyc02g085420.4.1 No alias component U1-70K of U1 small nuclear ribonucleoprotein... 0.06 SeedPlants
Zm00001e012949_P002 No alias component U1-70K of U1 small nuclear ribonucleoprotein... 0.09 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 140 209
IPR022023 U1snRNP70_N 41 129
No external refs found!