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  5. GSVIVT01018165001

GSVIVT01018165001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0011521 (SeedPlants) Phylogenetic Tree(s): OG_03_0011521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018165001
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.07 Archaeplastida
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.06 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.04 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01028238001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os02g48060.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g05010.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 Archaeplastida
LOC_Os12g40590.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os12g40730.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_29186g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_88831g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp1g01110.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc03g115540.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc07g043580.4.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 Archaeplastida
Solyc09g063010.4.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
Solyc11g005780.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e017430_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.05 LandPlants
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.03 LandPlants
GSVIVT01028238001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 LandPlants
Gb_06182 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os02g48060.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os07g05010.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 LandPlants
MA_88831g0010 No alias transcription factor (bHLH) 0.02 LandPlants
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 LandPlants
Solyc02g090950.1.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc03g115540.2.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc04g078690.3.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc07g043580.4.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 LandPlants
Solyc09g063010.4.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 LandPlants
Zm00001e017430_P001 No alias transcription factor (bHLH) 0.05 LandPlants
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 33 78
No external refs found!