Cre12.g501200


Description : 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis. E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein


Gene families : OG_01_0000673 (Gene family) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre12.g501200
Cluster HCCA cluster: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01024013001 No alias 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP... 0.01 Gene family
GSVIVT01024017001 No alias 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP... 0.02 Gene family
LOC_Os11g26910 Os11g0456300 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP... 0.04 Gene family
MA_82940g0020 No alias 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 108 155
IPR016073 Skp1_comp_POZ 4 62
No external refs found!