GSVIVT01016969001


Description : RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase


Gene families : OG_01_0001358 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001358_tree ,
OG_02_0001486 (LandPlants) Phylogenetic Tree(s): OG_02_0001486_tree ,
OG_03_0001201 (SeedPlants) Phylogenetic Tree(s): OG_03_0001201_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016969001
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000037.23 No alias RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase 0.02 Archaeplastida
MA_100058g0010 No alias poly(A) RNA polymerase 0.03 Archaeplastida
MA_136671g0010 No alias poly(A) RNA polymerase 0.03 Archaeplastida
Zm00001e024922_P001 No alias poly(A) RNA polymerase 0.03 Archaeplastida
Zm00001e030659_P006 No alias poly(A) RNA polymerase 0.03 Archaeplastida
LOC_Os02g13400.2 No alias poly(A) RNA polymerase 0.02 LandPlants
MA_136671g0010 No alias poly(A) RNA polymerase 0.02 LandPlants
Zm00001e030659_P006 No alias poly(A) RNA polymerase 0.02 LandPlants
Gb_12958 No alias poly(A) RNA polymerase 0.02 SeedPlants
LOC_Os02g13400.2 No alias poly(A) RNA polymerase 0.02 SeedPlants
Zm00001e030659_P006 No alias poly(A) RNA polymerase 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEA Interproscan
BP GO:0043631 RNA polyadenylation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007010 PolA_pol_RNA-bd_dom 367 425
IPR002934 Polymerase_NTP_transf_dom 93 169
IPR007012 PolA_pol_cen_dom 20 364
No external refs found!