GSVIVT01015849001


Description : Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidopsis thaliana


Gene families : OG_01_0010121 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010121_tree ,
OG_02_0010541 (LandPlants) Phylogenetic Tree(s): OG_02_0010541_tree ,
OG_03_0010187 (SeedPlants) Phylogenetic Tree(s): OG_03_0010187_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015849001
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT2G26790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.08 Archaeplastida
Gb_41674 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.03 Archaeplastida
Solyc05g012920.3.1 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.13 Archaeplastida
Zm00001e039987_P001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.06 Archaeplastida
AMTR_s00044p00087550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g26790,... 0.02 LandPlants
AT1G13800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
AT2G26790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 LandPlants
Gb_41674 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.03 LandPlants
Solyc05g012920.3.1 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.14 LandPlants
Zm00001e018562_P001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.02 LandPlants
Zm00001e039987_P001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.06 LandPlants
AMTR_s00044p00087550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g26790,... 0.02 SeedPlants
AT1G13800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 SeedPlants
AT2G26790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 SeedPlants
Gb_41674 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.02 SeedPlants
Solyc05g012920.3.1 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.14 SeedPlants
Zm00001e018562_P001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.02 SeedPlants
Zm00001e039987_P001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.06 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 163 188
IPR002885 Pentatricopeptide_repeat 194 223
IPR002885 Pentatricopeptide_repeat 334 363
IPR002885 Pentatricopeptide_repeat 522 550
IPR002885 Pentatricopeptide_repeat 482 512
IPR002885 Pentatricopeptide_repeat 378 410
IPR002885 Pentatricopeptide_repeat 558 586
IPR002885 Pentatricopeptide_repeat 654 685
IPR002885 Pentatricopeptide_repeat 417 464
IPR002885 Pentatricopeptide_repeat 296 333
IPR002885 Pentatricopeptide_repeat 595 643
IPR002885 Pentatricopeptide_repeat 233 274
No external refs found!