GSVIVT01015571001


Description : RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor


Gene families : OG_01_0000601 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000601_tree ,
OG_02_0000851 (LandPlants) Phylogenetic Tree(s): OG_02_0000851_tree ,
OG_03_0000882 (SeedPlants) Phylogenetic Tree(s): OG_03_0000882_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015571001
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00142040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 Archaeplastida
AMTR_s00048p00159380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 Archaeplastida
AMTR_s00051p00079490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.06 Archaeplastida
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.06 Archaeplastida
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.03 Archaeplastida
AT3G16830 TPR2 TOPLESS-related 2 0.04 Archaeplastida
Gb_32130 No alias transcriptional repressor (TPL). transcriptional... 0.04 Archaeplastida
Gb_37153 No alias transcriptional repressor (TPL). transcriptional... 0.03 Archaeplastida
LOC_Os03g14980.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 Archaeplastida
MA_16979g0020 No alias Topless-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c9_21250V3.1 No alias TOPLESS-related 1 0.02 Archaeplastida
Solyc01g100050.3.1 No alias transcriptional repressor (TPL). transcriptional... 0.04 Archaeplastida
Zm00001e001080_P001 No alias transcriptional repressor (TPL). transcriptional... 0.06 Archaeplastida
Zm00001e038558_P003 No alias transcriptional repressor (TPL). transcriptional... 0.07 Archaeplastida
AMTR_s00048p00159380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 LandPlants
AMTR_s00051p00079490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.06 LandPlants
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.05 LandPlants
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.03 LandPlants
AT3G16830 TPR2 TOPLESS-related 2 0.04 LandPlants
Gb_32130 No alias transcriptional repressor (TPL). transcriptional... 0.03 LandPlants
Gb_37153 No alias transcriptional repressor (TPL). transcriptional... 0.03 LandPlants
LOC_Os03g14980.1 No alias transcriptional repressor (TPL). transcriptional... 0.02 LandPlants
MA_10430083g0010 No alias transcriptional repressor (TPL). transcriptional... 0.02 LandPlants
Smo439915 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.02 LandPlants
Solyc01g100050.3.1 No alias transcriptional repressor (TPL). transcriptional... 0.04 LandPlants
Zm00001e001080_P001 No alias transcriptional repressor (TPL). transcriptional... 0.05 LandPlants
Zm00001e038558_P003 No alias transcriptional repressor (TPL). transcriptional... 0.05 LandPlants
AMTR_s00048p00159380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 SeedPlants
AMTR_s00051p00079490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.06 SeedPlants
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.04 SeedPlants
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.03 SeedPlants
AT3G16830 TPR2 TOPLESS-related 2 0.03 SeedPlants
Gb_32130 No alias transcriptional repressor (TPL). transcriptional... 0.03 SeedPlants
Gb_37153 No alias transcriptional repressor (TPL). transcriptional... 0.03 SeedPlants
LOC_Os03g14980.1 No alias transcriptional repressor (TPL). transcriptional... 0.02 SeedPlants
MA_10430083g0010 No alias transcriptional repressor (TPL). transcriptional... 0.02 SeedPlants
Solyc01g100050.3.1 No alias transcriptional repressor (TPL). transcriptional... 0.04 SeedPlants
Zm00001e001080_P001 No alias transcriptional repressor (TPL). transcriptional... 0.05 SeedPlants
Zm00001e038558_P003 No alias transcriptional repressor (TPL). transcriptional... 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 920 954
IPR001680 WD40_repeat 459 492
No external refs found!