GSVIVT01015461001

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter

Gene families : OG_01_0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000000 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0000000 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01015461001
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00113430	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At1g18485...	0.04	Archaeplastida
AMTR_s00040p00098330	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At3g46790,...	0.03	Archaeplastida
AMTR_s00066p00062930	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At3g49170,...	0.03	Archaeplastida
AT3G20730	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.04	Archaeplastida
AT3G47840	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.03	Archaeplastida
GSVIVT01028697001	No alias	Pentatricopeptide repeat-containing protein At3g49170,...	0.01	Archaeplastida
LOC_Os01g72930.1	No alias	Pentatricopeptide repeat-containing protein At3g13880...	0.03	Archaeplastida
LOC_Os07g31000.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os12g36620.1	No alias	Pentatricopeptide repeat-containing protein At4g13650...	0.02	Archaeplastida
Smo105356	No alias	Pentatricopeptide repeat-containing protein At3g63370,...	0.02	Archaeplastida
Smo11486	No alias	Pentatricopeptide repeat-containing protein At2g34400...	0.03	Archaeplastida
Smo127736	No alias	Pentatricopeptide repeat-containing protein At4g13650...	0.02	Archaeplastida
Smo442088	No alias	Pentatricopeptide repeat-containing protein At2g33760...	0.03	Archaeplastida
Smo51483	No alias	Pentatricopeptide repeat-containing protein At3g53360,...	0.03	Archaeplastida
Smo78092	No alias	Pentatricopeptide repeat-containing protein At3g57430,...	0.03	Archaeplastida
Solyc12g096680.1.1	No alias	Pentatricopeptide repeat-containing protein At2g03880,...	0.03	Archaeplastida
AMTR_s00010p00113430	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At1g18485...	0.03	LandPlants
AMTR_s00066p00062930	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At3g49170,...	0.02	LandPlants
AT3G20730	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.03	LandPlants
AT3G47840	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.02	LandPlants
GSVIVT01028697001	No alias	Pentatricopeptide repeat-containing protein At3g49170,...	0.01	LandPlants
LOC_Os01g72930.1	No alias	Pentatricopeptide repeat-containing protein At3g13880...	0.02	LandPlants
LOC_Os04g49520.1	No alias	Pentatricopeptide repeat-containing protein At2g22070...	0.02	LandPlants
LOC_Os12g36620.1	No alias	Pentatricopeptide repeat-containing protein At4g13650...	0.01	LandPlants
Smo79052	No alias	Pentatricopeptide repeat-containing protein At3g57430,...	0.02	LandPlants
Solyc11g006700.1.1	No alias	Pentatricopeptide repeat-containing protein At5g04780,...	0.02	LandPlants
LOC_Os01g72930.1	No alias	Pentatricopeptide repeat-containing protein At3g13880...	0.01	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	201	395
IPR013525	ABC_2_trans	856	1070
IPR003439	ABC_transporter-like	559	711
IPR002885	Pentatricopeptide_repeat	1146	1166
IPR002885	Pentatricopeptide_repeat	1789	1813
IPR002885	Pentatricopeptide_repeat	1546	1572
IPR002885	Pentatricopeptide_repeat	1689	1714
IPR002885	Pentatricopeptide_repeat	1516	1539
IPR002885	Pentatricopeptide_repeat	1718	1762
IPR002885	Pentatricopeptide_repeat	1442	1488
IPR002885	Pentatricopeptide_repeat	1341	1387
IPR002885	Pentatricopeptide_repeat	1578	1626
IPR013581	PDR_assoc	409	466

External Links

No external refs found!

GSVIVT01015461001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation