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  5. GSVIVT01015370001

GSVIVT01015370001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000288 (LandPlants) Phylogenetic Tree(s): OG_02_0000288_tree ,
OG_03_0002939 (SeedPlants) Phylogenetic Tree(s): OG_03_0002939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015370001
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00252990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00037p00177500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00068p00092800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00109p00061950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.14 Archaeplastida
AT2G39880 AtMYB25, MYB25 myb domain protein 25 0.03 Archaeplastida
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.19 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre12.g522400 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01008402001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01030434001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g36250.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g13570.1 No alias transcription factor (MYB) 0.19 Archaeplastida
MA_605711g0010 No alias Transcription factor MYB3R-4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_9483804g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c10_10240V3.1 No alias Homeodomain-like protein 0.07 Archaeplastida
Pp3c2_250V3.1 No alias No annotation 0.02 Archaeplastida
Smo80215 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc01g090530.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g005710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g071690.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g052300.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g068320.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc11g011050.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc11g071300.2.1 No alias transcription factor (MYB) 0.13 Archaeplastida
Solyc12g008670.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e016403_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030314_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
AMTR_s00109p00061950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.14 LandPlants
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.19 LandPlants
LOC_Os12g13570.1 No alias transcription factor (MYB) 0.19 LandPlants
MA_605711g0010 No alias Transcription factor MYB3R-4 OS=Arabidopsis thaliana... 0.02 LandPlants
Pp3c10_10240V3.1 No alias Homeodomain-like protein 0.08 LandPlants
Solyc08g068320.3.1 No alias transcription factor (MYB) 0.05 LandPlants
Solyc08g080580.4.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc11g071300.2.1 No alias transcription factor (MYB) 0.14 LandPlants
Zm00001e016403_P001 No alias no hits & (original description: none) 0.11 LandPlants
AMTR_s00109p00061950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.12 SeedPlants
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.16 SeedPlants
LOC_Os12g13570.1 No alias transcription factor (MYB) 0.16 SeedPlants
Solyc08g068320.3.1 No alias transcription factor (MYB) 0.04 SeedPlants
Solyc11g071300.2.1 No alias transcription factor (MYB) 0.12 SeedPlants
Zm00001e016403_P001 No alias no hits & (original description: none) 0.09 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 45 91
No external refs found!