AT2G26790


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0010121 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010121_tree ,
OG_02_0010541 (LandPlants) Phylogenetic Tree(s): OG_02_0010541_tree ,
OG_03_0010187 (SeedPlants) Phylogenetic Tree(s): OG_03_0010187_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G26790
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00087550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g26790,... 0.04 Archaeplastida
GSVIVT01015849001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.08 Archaeplastida
Gb_41674 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.02 Archaeplastida
Solyc05g012920.3.1 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.07 Archaeplastida
Zm00001e039987_P001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.05 Archaeplastida
AMTR_s00044p00087550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g26790,... 0.04 LandPlants
GSVIVT01015849001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.07 LandPlants
Gb_41674 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.02 LandPlants
Solyc05g012920.3.1 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.07 LandPlants
Zm00001e018562_P001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.02 LandPlants
Zm00001e039987_P001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.05 LandPlants
AMTR_s00044p00087550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g26790,... 0.04 SeedPlants
GSVIVT01015849001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.05 SeedPlants
Solyc05g012920.3.1 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.06 SeedPlants
Zm00001e018562_P001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.02 SeedPlants
Zm00001e039987_P001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 387 434
IPR002885 Pentatricopeptide_repeat 624 671
IPR002885 Pentatricopeptide_repeat 708 754
IPR002885 Pentatricopeptide_repeat 456 504
IPR002885 Pentatricopeptide_repeat 211 239
IPR002885 Pentatricopeptide_repeat 289 314
IPR002885 Pentatricopeptide_repeat 356 384
IPR002885 Pentatricopeptide_repeat 562 583
IPR002885 Pentatricopeptide_repeat 151 176
IPR002885 Pentatricopeptide_repeat 597 622
IPR002885 Pentatricopeptide_repeat 248 274
IPR002885 Pentatricopeptide_repeat 323 349
No external refs found!