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  5. GSVIVT01014791001

GSVIVT01014791001


Description : UPF0481 protein At3g47200 OS=Arabidopsis thaliana


Gene families : OG_01_0000139 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000139_tree ,
OG_02_0000052 (LandPlants) Phylogenetic Tree(s): OG_02_0000052_tree ,
OG_03_0000062 (SeedPlants) Phylogenetic Tree(s): OG_03_0000062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014791001
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G65985 No alias Plant protein of unknown function (DUF247) 0.03 Archaeplastida
AT1G67150 No alias Plant protein of unknown function (DUF247) 0.05 Archaeplastida
AT2G36430 No alias Plant protein of unknown function (DUF247) 0.03 Archaeplastida
AT3G47200 No alias Plant protein of unknown function (DUF247) 0.03 Archaeplastida
AT3G47210 No alias Plant protein of unknown function (DUF247) 0.03 Archaeplastida
AT3G47250 No alias Plant protein of unknown function (DUF247) 0.05 Archaeplastida
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.03 Archaeplastida
AT3G50160 No alias Plant protein of unknown function (DUF247) 0.03 Archaeplastida
AT3G60470 No alias Plant protein of unknown function (DUF247) 0.04 Archaeplastida
AT5G11290 No alias Plant protein of unknown function (DUF247) 0.09 Archaeplastida
AT5G22540 No alias Plant protein of unknown function (DUF247) 0.04 Archaeplastida
AT5G22550 No alias Plant protein of unknown function (DUF247) 0.05 Archaeplastida
GSVIVT01033580001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01033794001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01035820001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01035823001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_12420 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 Archaeplastida
Gb_27805 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_36108 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 Archaeplastida
Gb_36109 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g38120.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os01g38190.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g15230.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os06g37280.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g25030.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os08g42570.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os11g33394.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_10426384g0010 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10426384g0020 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10434321g0020 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_26069g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 Archaeplastida
MA_6919317g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9718623g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g093020.3.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc04g008920.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g006690.3.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e024850_P001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e041187_P001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.03 LandPlants
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.02 LandPlants
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 LandPlants
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.02 LandPlants
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.02 LandPlants
AT1G67150 No alias Plant protein of unknown function (DUF247) 0.05 LandPlants
AT3G47250 No alias Plant protein of unknown function (DUF247) 0.03 LandPlants
AT3G50160 No alias Plant protein of unknown function (DUF247) 0.03 LandPlants
AT3G60470 No alias Plant protein of unknown function (DUF247) 0.04 LandPlants
AT5G11290 No alias Plant protein of unknown function (DUF247) 0.09 LandPlants
AT5G22540 No alias Plant protein of unknown function (DUF247) 0.03 LandPlants
AT5G22550 No alias Plant protein of unknown function (DUF247) 0.04 LandPlants
GSVIVT01033794001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 LandPlants
GSVIVT01035820001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 LandPlants
Gb_12420 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 LandPlants
Gb_27805 No alias no hits & (original description: none) 0.04 LandPlants
Gb_36108 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 LandPlants
LOC_Os01g38120.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 LandPlants
LOC_Os01g38190.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 LandPlants
LOC_Os05g15230.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 LandPlants
LOC_Os06g37280.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os08g25030.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 LandPlants
LOC_Os08g42570.1 No alias no hits & (original description: none) 0.06 LandPlants
LOC_Os11g33394.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 LandPlants
MA_10426384g0010 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 LandPlants
MA_10426384g0020 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 LandPlants
MA_10434321g0020 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 LandPlants
MA_109716g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 LandPlants
MA_6919317g0010 No alias no hits & (original description: none) 0.03 LandPlants
Solyc02g093020.3.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 LandPlants
Solyc05g006690.3.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 LandPlants
Zm00001e024232_P001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 LandPlants
Zm00001e024850_P001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 LandPlants
Zm00001e041187_P001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 LandPlants
AMTR_s00016p00254390 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 SeedPlants
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.02 SeedPlants
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 SeedPlants
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.02 SeedPlants
AT3G47250 No alias Plant protein of unknown function (DUF247) 0.02 SeedPlants
AT5G11290 No alias Plant protein of unknown function (DUF247) 0.07 SeedPlants
GSVIVT01035820001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 SeedPlants
Gb_12420 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 SeedPlants
Gb_36108 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 SeedPlants
LOC_Os08g25030.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 SeedPlants
LOC_Os11g33394.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 SeedPlants
LOC_Os11g33970.1 No alias no hits & (original description: none) 0.02 SeedPlants
MA_10426384g0010 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 SeedPlants
MA_316258g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc02g093020.3.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004158 DUF247_pln 53 465
No external refs found!