GSVIVT01014602001


Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component


Gene families : OG_01_0002452 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002452_tree ,
OG_02_0001770 (LandPlants) Phylogenetic Tree(s): OG_02_0001770_tree ,
OG_03_0001756 (SeedPlants) Phylogenetic Tree(s): OG_03_0001756_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014602001
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00257260 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 Archaeplastida
AT1G03380 ATATG18G, ATG18G homolog of yeast autophagy 18 (ATG18) G 0.07 Archaeplastida
Gb_30797 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 Archaeplastida
LOC_Os05g33610.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Mp3g05770.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 Archaeplastida
Pp3c23_8190V3.1 No alias homolog of yeast autophagy 18 (ATG18) H 0.02 Archaeplastida
Pp3c8_5760V3.1 No alias homolog of yeast autophagy 18 (ATG18) H 0.03 Archaeplastida
Solyc07g064060.3.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 Archaeplastida
Zm00001e019603_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Zm00001e027088_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Zm00001e031636_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
AMTR_s00019p00257260 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 LandPlants
AT1G03380 ATATG18G, ATG18G homolog of yeast autophagy 18 (ATG18) G 0.07 LandPlants
Gb_30797 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 LandPlants
LOC_Os05g33610.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 LandPlants
Mp3g05770.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 LandPlants
Pp3c20_18810V3.1 No alias homolog of yeast autophagy 18 (ATG18) H 0.02 LandPlants
Pp3c8_5760V3.1 No alias homolog of yeast autophagy 18 (ATG18) H 0.03 LandPlants
Smo442028 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 LandPlants
Solyc07g064060.3.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 LandPlants
Zm00001e019603_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 LandPlants
Zm00001e027088_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 LandPlants
AMTR_s00019p00257260 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 SeedPlants
AT1G03380 ATATG18G, ATG18G homolog of yeast autophagy 18 (ATG18) G 0.07 SeedPlants
Gb_30797 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 SeedPlants
LOC_Os05g33610.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 SeedPlants
MA_9928402g0010 No alias no hits & (original description: none) 0.01 SeedPlants
Solyc07g064060.3.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 SeedPlants
Zm00001e019603_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 SeedPlants
Zm00001e027088_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 SeedPlants
Zm00001e031636_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 374 403
No external refs found!