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  5. GSVIVT01014589001

GSVIVT01014589001


Description : Nutrient uptake.iron uptake.regulation.PRI1 signal transduction factor


Gene families : OG_01_0000742 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000742_tree ,
OG_02_0001001 (LandPlants) Phylogenetic Tree(s): OG_02_0001001_tree ,
OG_03_0000987 (SeedPlants) Phylogenetic Tree(s): OG_03_0000987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014589001
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Gb_05307 No alias transcription factor (bHLH). iron homeostasis regulator (POPEYE) 0.03 Archaeplastida
Pp3c12_4630V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c5_28980V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Solyc07g064040.3.1 No alias transcription factor (bHLH). PRI1 iron uptake signal... 0.04 Archaeplastida
Zm00001e035178_P001 No alias transcription factor (bHLH). PRI1 iron uptake signal... 0.05 Archaeplastida
Pp3c12_4630V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
Pp3c5_28980V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
Solyc07g064040.3.1 No alias transcription factor (bHLH). PRI1 iron uptake signal... 0.03 LandPlants
Zm00001e035178_P001 No alias transcription factor (bHLH). PRI1 iron uptake signal... 0.05 LandPlants
LOC_Os02g02480.3 No alias transcription factor (bHLH). PRI1 iron uptake signal... 0.02 SeedPlants
Solyc07g064040.3.1 No alias transcription factor (bHLH). PRI1 iron uptake signal... 0.03 SeedPlants
Zm00001e035178_P001 No alias transcription factor (bHLH). PRI1 iron uptake signal... 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 80 127
No external refs found!