GSVIVT01013702001


Description : DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0005822 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005822_tree ,
OG_02_0008168 (LandPlants) Phylogenetic Tree(s): OG_02_0008168_tree ,
OG_03_0009649 (SeedPlants) Phylogenetic Tree(s): OG_03_0009649_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013702001
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00161460 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.04 Archaeplastida
AT4G09730 RH39 RH39 0.17 Archaeplastida
Gb_33379 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.09 Archaeplastida
MA_10427047g0010 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.04 Archaeplastida
MA_12327g0010 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.04 Archaeplastida
Mp5g09580.1 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.04 Archaeplastida
Solyc12g056740.2.1 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.11 Archaeplastida
Zm00001e029916_P001 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.1 Archaeplastida
AMTR_s00078p00161460 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.04 LandPlants
AT4G09730 RH39 RH39 0.16 LandPlants
Gb_33379 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.09 LandPlants
MA_12327g0010 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.04 LandPlants
Mp5g09580.1 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.03 LandPlants
Smo86079 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana 0.02 LandPlants
Solyc12g056740.2.1 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.09 LandPlants
Zm00001e029916_P001 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.1 LandPlants
AMTR_s00078p00161460 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.03 SeedPlants
AT4G09730 RH39 RH39 0.16 SeedPlants
Gb_33379 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.09 SeedPlants
MA_12327g0010 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.04 SeedPlants
Solyc12g056740.2.1 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.09 SeedPlants
Zm00001e029916_P001 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.09 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 13 196
IPR001650 Helicase_C 232 343
No external refs found!