AT2G24820 (TIC55-II)


Aliases : TIC55-II

Description : translocon at the inner envelope membrane of chloroplasts 55-II


Gene families : OG_01_0006467 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006467_tree ,
OG_02_0008625 (LandPlants) Phylogenetic Tree(s): OG_02_0008625_tree ,
OG_03_0009070 (SeedPlants) Phylogenetic Tree(s): OG_03_0009070_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G24820
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00118960 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.03 Archaeplastida
GSVIVT01036007001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.04 Archaeplastida
Gb_20939 No alias component Tic55 of inner envelope TIC translocation system 0.04 Archaeplastida
LOC_Os02g54980.1 No alias component Tic55 of inner envelope TIC translocation system 0.04 Archaeplastida
Pp3c7_15550V3.1 No alias translocon at the inner envelope membrane of chloroplasts 55-II 0.04 Archaeplastida
Solyc12g096550.2.1 No alias component Tic55 of inner envelope TIC translocation system 0.09 Archaeplastida
Zm00001e016099_P001 No alias component Tic55 of inner envelope TIC translocation system 0.03 Archaeplastida
GSVIVT01036007001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.04 LandPlants
Gb_20939 No alias component Tic55 of inner envelope TIC translocation system 0.03 LandPlants
LOC_Os02g54980.1 No alias component Tic55 of inner envelope TIC translocation system 0.04 LandPlants
Pp3c11_12710V3.1 No alias translocon at the inner envelope membrane of chloroplasts 55-II 0.02 LandPlants
Pp3c7_15550V3.1 No alias translocon at the inner envelope membrane of chloroplasts 55-II 0.04 LandPlants
Solyc12g096550.2.1 No alias component Tic55 of inner envelope TIC translocation system 0.08 LandPlants
Zm00001e016099_P001 No alias component Tic55 of inner envelope TIC translocation system 0.03 LandPlants
GSVIVT01036007001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 SeedPlants
Gb_20939 No alias component Tic55 of inner envelope TIC translocation system 0.03 SeedPlants
LOC_Os02g54980.1 No alias component Tic55 of inner envelope TIC translocation system 0.03 SeedPlants
Solyc12g096550.2.1 No alias component Tic55 of inner envelope TIC translocation system 0.08 SeedPlants

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0045036 protein targeting to chloroplast IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013626 PaO 293 378
IPR017941 Rieske_2Fe-2S 87 171
No external refs found!