GSVIVT01011897001


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor


Gene families : OG_01_0000884 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000884_tree ,
OG_02_0000594 (LandPlants) Phylogenetic Tree(s): OG_02_0000594_tree ,
OG_03_0000583 (SeedPlants) Phylogenetic Tree(s): OG_03_0000583_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011897001
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.04 Archaeplastida
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.05 Archaeplastida
Gb_02486 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
LOC_Os02g49880.1 No alias transcription factor (BBX-CO) 0.09 Archaeplastida
LOC_Os06g15330.1 No alias transcription factor (BBX-CO) 0.05 Archaeplastida
Mp3g19670.1 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Pp3c10_22950V3.1 No alias CCT motif family protein 0.03 Archaeplastida
Pp3c3_35020V3.1 No alias B-box type zinc finger protein with CCT domain 0.01 Archaeplastida
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.04 Archaeplastida
Zm00001e005433_P002 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Zm00001e030952_P002 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Zm00001e036760_P001 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.03 LandPlants
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.05 LandPlants
AT4G25990 CIL CCT motif family protein 0.01 LandPlants
LOC_Os02g49880.1 No alias transcription factor (BBX-CO) 0.07 LandPlants
LOC_Os06g15330.1 No alias transcription factor (BBX-CO) 0.02 LandPlants
Mp3g19670.1 No alias transcription factor (BBX-CO) 0.01 LandPlants
Pp3c10_22950V3.1 No alias CCT motif family protein 0.01 LandPlants
Pp3c3_35020V3.1 No alias B-box type zinc finger protein with CCT domain 0.01 LandPlants
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.04 LandPlants
Solyc05g009310.3.1 No alias transcription factor (BBX-CO) 0.02 LandPlants
AMTR_s00049p00156610 evm_27.TU.AmTr_v1... No description available 0.01 SeedPlants
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.02 SeedPlants
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.04 SeedPlants
AT4G25990 CIL CCT motif family protein 0.01 SeedPlants
LOC_Os02g49880.1 No alias transcription factor (BBX-CO) 0.02 SeedPlants
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.04 SeedPlants
Solyc05g009310.3.1 No alias transcription factor (BBX-CO) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010402 CCT_domain 376 418
IPR000315 Znf_B-box 16 59
No external refs found!