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  5. GSVIVT01011680001

GSVIVT01011680001


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED23 component


Gene families : OG_01_0006926 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006926_tree ,
OG_02_0005266 (LandPlants) Phylogenetic Tree(s): OG_02_0005266_tree ,
OG_03_0005449 (SeedPlants) Phylogenetic Tree(s): OG_03_0005449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011680001
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00196600 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.07 Archaeplastida
AT1G23230 No alias CONTAINS InterPro DOMAIN/s: Mediator complex subunit... 0.08 Archaeplastida
Gb_41520 No alias component MED23 of tail module of MEDIATOR transcription... 0.07 Archaeplastida
LOC_Os02g49992.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.09 Archaeplastida
MA_10281498g0010 No alias component MED23 of tail module of MEDIATOR transcription... 0.06 Archaeplastida
MA_10430175g0010 No alias no hits & (original description: none) 0.11 Archaeplastida
MA_167665g0010 No alias Mediator of RNA polymerase II transcription subunit 23... 0.03 Archaeplastida
Mp1g05140.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.02 Archaeplastida
Pp3c27_2940V3.1 No alias No annotation 0.08 Archaeplastida
Smo76173 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Solyc05g016440.3.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.13 Archaeplastida
Solyc05g016460.2.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.08 Archaeplastida
Zm00001e015737_P001 No alias component MED23 of tail module of MEDIATOR transcription... 0.1 Archaeplastida
AMTR_s00060p00196600 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.06 LandPlants
AT1G23230 No alias CONTAINS InterPro DOMAIN/s: Mediator complex subunit... 0.07 LandPlants
Gb_41520 No alias component MED23 of tail module of MEDIATOR transcription... 0.07 LandPlants
LOC_Os02g49992.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.08 LandPlants
MA_10281498g0010 No alias component MED23 of tail module of MEDIATOR transcription... 0.04 LandPlants
MA_10430175g0010 No alias no hits & (original description: none) 0.08 LandPlants
Mp1g05140.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.02 LandPlants
Pp3c27_2940V3.1 No alias No annotation 0.05 LandPlants
Smo76173 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 LandPlants
Solyc05g016440.3.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.12 LandPlants
Solyc05g016460.2.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.08 LandPlants
Zm00001e015737_P001 No alias component MED23 of tail module of MEDIATOR transcription... 0.08 LandPlants
AMTR_s00060p00196600 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.06 SeedPlants
AT1G23230 No alias CONTAINS InterPro DOMAIN/s: Mediator complex subunit... 0.07 SeedPlants
Gb_41520 No alias component MED23 of tail module of MEDIATOR transcription... 0.05 SeedPlants
LOC_Os02g49992.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.08 SeedPlants
MA_10281498g0010 No alias component MED23 of tail module of MEDIATOR transcription... 0.04 SeedPlants
MA_10430175g0010 No alias no hits & (original description: none) 0.07 SeedPlants
Solyc05g016440.3.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.12 SeedPlants
Solyc05g016460.2.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.08 SeedPlants
Zm00001e015737_P001 No alias component MED23 of tail module of MEDIATOR transcription... 0.07 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021629 Mediator_Med23 627 1164
No external refs found!