GSVIVT01011543001


Description : Solute transport.channels.OSCA calcium-permeable channel


Gene families : OG_01_0000175 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000175_tree ,
OG_02_0001075 (LandPlants) Phylogenetic Tree(s): OG_02_0001075_tree ,
OG_03_0000936 (SeedPlants) Phylogenetic Tree(s): OG_03_0000936_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011543001
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AT1G10090 No alias Early-responsive to dehydration stress protein (ERD4) 0.01 Archaeplastida
LOC_Os01g72210.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
LOC_Os05g51630.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
LOC_Os12g39320.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Mp8g07950.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
Pp3c17_22430V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Archaeplastida
Pp3c6_25510V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Archaeplastida
Pp3c8_3900V3.1 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Archaeplastida
Pp3c9_16680V3.1 No alias hypothetical protein 1 0.03 Archaeplastida
Pp3c9_3190V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.04 Archaeplastida
Smo41460 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 Archaeplastida
Solyc02g081030.4.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
LOC_Os05g51630.1 No alias calcium-permeable channel (OSCA) 0.03 LandPlants
Mp7g04480.1 No alias calcium-permeable channel (OSCA) 0.01 LandPlants
Solyc02g081030.4.1 No alias calcium-permeable channel (OSCA) 0.02 LandPlants
LOC_Os05g51630.1 No alias calcium-permeable channel (OSCA) 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003864 RSN1_7TM 372 644
IPR032880 Csc1_N 7 178
IPR027815 PHM7_cyt 199 361
No external refs found!