GSVIVT01011330001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG_01_0003579 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003579_tree ,
OG_02_0002485 (LandPlants) Phylogenetic Tree(s): OG_02_0002485_tree ,
OG_03_0003866 (SeedPlants) Phylogenetic Tree(s): OG_03_0003866_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011330001
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00183690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
AT1G06170 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT2G31215 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT2G31220 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
LOC_Os01g18870.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
MA_1220g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_155093g0010 No alias transcription factor (bHLH) 0.01 Archaeplastida
Pp3c5_20560V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_8660V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Solyc01g081090.2.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc01g081100.3.1 No alias transcription factor (bHLH) 0.09 Archaeplastida
Zm00001e015546_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e025435_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida
AMTR_s00048p00183690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 LandPlants
AT1G06170 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 LandPlants
AT2G31220 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
LOC_Os01g18870.1 No alias transcription factor (bHLH) 0.03 LandPlants
MA_1220g0010 No alias transcription factor (bHLH) 0.05 LandPlants
MA_155093g0010 No alias transcription factor (bHLH) 0.01 LandPlants
MA_8558922g0010 No alias transcription factor (bHLH) 0.01 LandPlants
Pp3c6_8660V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
Solyc01g081090.2.1 No alias transcription factor (bHLH) 0.04 LandPlants
Solyc01g081100.3.1 No alias transcription factor (bHLH) 0.08 LandPlants
Zm00001e015546_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e025435_P001 No alias transcription factor (bHLH) 0.04 LandPlants
AMTR_s00048p00183690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 SeedPlants
AT1G06170 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 SeedPlants
AT2G31220 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 SeedPlants
Gb_19452 No alias transcription factor (bHLH) 0.01 SeedPlants
MA_1220g0010 No alias transcription factor (bHLH) 0.02 SeedPlants
MA_155093g0010 No alias transcription factor (bHLH) 0.01 SeedPlants
Solyc01g081090.2.1 No alias transcription factor (bHLH) 0.03 SeedPlants
Solyc01g081100.3.1 No alias transcription factor (bHLH) 0.07 SeedPlants
Zm00001e015546_P001 No alias transcription factor (bHLH) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 229 273
No external refs found!